RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PYROXD2Q8N2H3 581 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 CCDC185Q8N715 623 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TP53I13Q8NBR0 393 aaPredicted RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 SLC30A5Q8TAD4 765 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 GPT2Q8TD30 523 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TSACCQ96A04 125 aaPredicted RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 ISG20Q96AZ6 181 aaKnown RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 WBP1Q96G27 269 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TUBGCP2Q9BSJ2 902 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 WRAP53Q9BUR4 548 aaKnown RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 NOL6Q9H6R4 1146 aaKnown RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 SIRPGQ9P1W8 387 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 SPASTQ9UBP0 616 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 GULP1Q9UBP9 304 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 PADI4Q9UM07 663 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 MYO18BQ8IUG5 2567 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 BOD1L1Q8NFC6 3051 aa9.4□□□□□ -0.91
CNOT9-202ENST00000295701 B8ZZF3 427 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 LMO7DNF2Z398 122 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 PES1O00541 588 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 NTN3O00634 580 aaPredicted RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 BUB1O43683 1085 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 TM7SF2O76062 418 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 TMCC1O94876 653 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 LRIG2O94898 1065 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 POP4O95707 220 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 PRKCGP05129 697 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 ANXA6P08133 673 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 PLEKP08567 350 aaPredicted RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 C6P13671 934 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 HGFP14210 728 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 KLK7P49862 253 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 THOP1P52888 689 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 UCNP55089 124 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 SNRPD1P62314 119 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 CCL7P80098 99 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 POLD3Q15054 466 aaPredicted RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 IRF4Q15306 451 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 TGIF1Q15583 401 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 GDPD4Q6W3E5 623 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 RD3Q7Z3Z2 195 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 HID1Q8IV36 788 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 SFTPA2Q8IWL1 248 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 EXD3Q8N9H8 876 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 KYQ8NBH2 561 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 DENND6BQ8NEG7 585 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 OR2AP1Q8NGE2 309 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 SNRNP27Q8WVK2 155 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 BTN2A2Q8WVV5 523 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 ASB12Q8WXK4 309 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 FUBP1Q96AE4 644 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 RAB7BQ96AH8 199 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 FOXP3Q9BZS1 431 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 SLC13A1Q9BZW2 595 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 SAMSN1Q9NSI8 373 aaKnown RBP9.39□□□□□ -0.91
CNOT9-202ENST00000295701 TMEM248Q9NWD8 314 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 PCDHGA8Q9Y5G5 932 aa9.39□□□□□ -0.91
CNOT9-202ENST00000295701 A0A1W2PQM1 296 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 KDELR3O43731 214 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 GFPT2O94808 682 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PIGNO95427 931 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 GSRP00390 522 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
CNOT9-202ENST00000295701 UCHL3P15374 230 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 HDAC4P56524 1084 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 FMO1Q01740 532 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 NRG1Q02297 640 aaPredicted RBP9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PPARDQ03181 441 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PTP4A2Q12974 167 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 SPIDRQ14159 915 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PTK2BQ14289 1009 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 BECN1Q14457 450 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CYTH1Q15438 398 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 ALG11Q2TAA5 492 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 WSCD2Q2TBF2 565 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 ARL13BQ3SXY8 428 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
CNOT9-202ENST00000295701 ENPP7Q6UWV6 458 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CLEC14AQ86T13 490 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 SDR16C5Q8N3Y7 309 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 WDR36Q8NI36 951 aaKnown RBP9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CXorf40AQ8TE69 158 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 GLMNQ92990 594 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CCDC74AQ96AQ1 378 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 TBC1D31Q96DN5 1066 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 EXOC2Q96KP1 924 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 PCDHB18PQ96TA0 734 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 C11orf70Q9BRQ4 267 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 STK33Q9BYT3 514 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 MAGEH1Q9H213 219 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
CNOT9-202ENST00000295701 LHX3Q9UBR4 397 aa9.38□□□□□ -0.91
CNOT9-202ENST00000295701 NOCTQ9UK39 431 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms