RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
C9orf43-201ENST00000288462 KCNK4Q9NYG8 393 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 VPS51Q9UID3 782 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 VPS28Q9UK41 221 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 ARHGAP26Q9UNA1 814 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 SPO11Q9Y5K1 396 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 ARL5AQ9Y689 179 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
C9orf43-201ENST00000288462 GBF1Q92538 1859 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
C9orf43-201ENST00000288462 NOTCH4Q99466 2003 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 A0A087X1B8 175 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 CCL16O15467 120 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 TLL1O43897 1013 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 TAS2R39P59534 338 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 PRAMEP78395 509 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 ZNF789Q5FWF6 425 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 RALGPS1Q5JS13 557 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 PPM1LQ5SGD2 360 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 RBM20Q5T481 1227 aaKnown RBP10.23□□□□□ -0.77
C9orf43-201ENST00000288462 NCEH1Q6PIU2 408 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 LINGO4Q6UY18 593 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 CCDC91Q7Z6B0 441 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 TMEM151AQ8N4L1 468 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 TDRD5Q8NAT2 981 aaKnown RBP10.23□□□□□ -0.77
C9orf43-201ENST00000288462 PPP1R14CQ8TAE6 165 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 SHKBP1Q8TBC3 707 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 SPPL3Q8TCT6 385 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 STYXQ8WUJ0 223 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
C9orf43-201ENST00000288462 GPR78Q96P69 363 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 OMDQ99983 421 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 CORO1BQ9BR76 489 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 MARCH4Q9P2E8 410 aaPredicted RBP10.23□□□□□ -0.77
C9orf43-201ENST00000288462 SH3BP1Q9Y3L3 701 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 NUMBLQ9Y6R0 609 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
C9orf43-201ENST00000288462 TARM1B6A8C7 271 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 LEFTY2O00292 366 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CCL22O00626 93 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 HGSO14964 777 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ITM2AO43736 263 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 H2AFYO75367 372 aaKnown RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 UNC5CO95185 931 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 WISP3O95389 354 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 FGF19O95750 216 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 S1PR4O95977 384 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SBK3P0C264 359 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 MYL2P10916 166 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 RALBP11234 206 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 MYL4P12829 197 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 GJA1P17302 382 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 AVPR1AP37288 418 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CCR2P41597 374 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SLC1A6P48664 564 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 UBE3AQ05086 875 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TRAF2Q12933 501 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ZNF460Q14592 562 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TSNAXIP1Q2TAA8 658 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 HSF5Q4G112 596 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 MPPE1Q53F39 396 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 LRRC8EQ6NSJ5 796 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 PTAR1Q7Z6K3 402 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CLNKQ7Z7G1 428 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 RNF135Q8IUD6 432 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ARID3BQ8IVW6 561 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 MFN1Q8IWA4 741 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TNS4Q8IZW8 715 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 GPATCH11Q8N954 259 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 KCTD4Q8WVF5 259 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TBATAQ96M53 351 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TSNARE1Q96NA8 513 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SORT1Q99523 831 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SIKE1Q9BRV8 207 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SLC46A2Q9BY10 475 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 RASSF4Q9H2L5 321 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TASP1Q9H6P5 420 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TLR9Q9NR96 1032 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ACOT9Q9Y305 439 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 RWDD3Q9Y3V2 267 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 DOCK6Q96HP0 2047 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CCDC162PA2VCL2 907 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CFAP73A6NFT4 308 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 OR51F1A6NGY5 319 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TMEM114B3SHH9 223 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 C5orf67F2Z3F1 127 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TK2O00142 265 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 LYPLA1O75608 230 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 KLHL2O95198 593 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CRTAMO95727 393 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 GOT2P00505 430 aaKnown RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 PIRTP0C851 137 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 EN2P19622 333 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 OGNP20774 298 aaKnown RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 SAT1P21673 171 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 459.4 ms