RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SERPINF2P08697 491 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 GNSP15586 552 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 XPAP23025 273 aaPredicted RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 CSNK1EP49674 416 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 RPS21P63220 83 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 TMEM52BQ4KMG9 183 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 CEP76Q8TAP6 659 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 PIH1D2Q8WWB5 315 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 IMP4Q96G21 291 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 SERAC1Q96JX3 654 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 RBM15Q96T37 977 aaKnown RBP eCLIP20■□□□□ 0.79
TIMP4-201ENST00000287814 WRAP53Q9BUR4 548 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 USP29Q9HBJ7 922 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 FZD3Q9NPG1 666 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SUSD2Q9UGT4 822 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SLC6A14Q9UN76 642 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 CHKBQ9Y259 395 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 CA5BQ9Y2D0 317 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 JRKLQ9Y4A0 524 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 LNP1A1A4G5 178 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 GOLGA6L9A6NEM1 432 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 MTSS1O43312 755 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 PAK4O96013 591 aaPredicted RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 MMP12P39900 470 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SUOXP51687 545 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 BNC1Q01954 994 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 ARMC12Q5T9G4 340 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 KIAA1161Q6NSJ0 714 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 DARS2Q6PI48 645 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 PAF1Q8N7H5 531 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 TTC13Q8NBP0 860 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SPATA22Q8NHS9 363 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SLC35B2Q8TB61 432 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 ATG4AQ8WYN0 398 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 TADA1Q96BN2 335 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 C1QTNF2Q9BXJ5 285 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 TDRD1Q9BXT4 1180 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 SLC17A9Q9BYT1 436 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 SLC25A51Q9H1U9 297 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 HAUS2Q9NVX0 235 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 TPX2Q9ULW0 747 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 DNAH14Q0VDD8 3507 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 PI4KAP42356 2102 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 A8MX80 341 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 CPP00450 1065 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 WNT1P04628 370 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 POLR2LP62875 67 aaKnown RBP19.99■□□□□ 0.79
TIMP4-201ENST00000287814 FAM193AP78312 1265 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 RALGDSQ12967 914 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 PID1Q7Z2X4 250 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 CDKL3Q8IVW4 592 aaPredicted RBP19.99■□□□□ 0.79
TIMP4-201ENST00000287814 GPR161Q8N6U8 529 aaKnown RBP19.99■□□□□ 0.79
TIMP4-201ENST00000287814 MYOCQ99972 504 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 DNPEPQ9ULA0 475 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 PLXNA2O75051 1894 aa19.99■□□□□ 0.79
TIMP4-201ENST00000287814 DMXL1Q9Y485 3027 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 A0A0U1RQS6 177 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 A0A1W2PR77 199 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 F5H423 210 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 RAD51BO15315 384 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 MT-CYBP00156 380 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 ATP1A1P05023 1023 aaKnown RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 NFKB1P19838 968 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 AFF3P51826 1226 aaKnown RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 RACK1P63244 317 aaKnown RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 ELP6Q0PNE2 266 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 SIX1Q15475 284 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 SETMARQ53H47 684 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 ERAP2Q6P179 960 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 C12orf50Q8NA57 414 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 UBP1Q9NZI7 540 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 KLHL8Q9P2G9 620 aaPredicted RBP19.98■□□□□ 0.79
TIMP4-201ENST00000287814 B4GALT6Q9UBX8 382 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 PHTF1Q9UMS5 762 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 DMTF1Q9Y222 760 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 COQ6Q9Y2Z9 468 aa19.98■□□□□ 0.79
TIMP4-201ENST00000287814 A0A1B0GVT2 93 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 A0A1W2PQ67 120 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 KCNN4O15554 427 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 KIF5CO60282 957 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 CTPS1P17812 591 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 ENGP17813 658 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 LIG3P49916 1009 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 NAPEPLDQ6IQ20 393 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 RABEPKQ7Z6M1 372 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 TMEM145Q8NBT3 493 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 CXorf40AQ8TE69 158 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 C1orf54Q8WWF1 131 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 VAT1Q99536 393 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 KLF6Q99612 283 aaPredicted RBP19.97■□□□□ 0.79
TIMP4-201ENST00000287814 NUSAP1Q9BXS6 441 aaKnown RBP19.97■□□□□ 0.79
TIMP4-201ENST00000287814 PCDH9Q9HC56 1237 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 AASDHPPTQ9NRN7 309 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 PPIL1Q9Y3C6 166 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 TRPM6Q9BX84 2022 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 PRAMEF26H0Y7S4 382 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 H0Y8X5 98 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 CEP104O60308 925 aa19.97■□□□□ 0.79
TIMP4-201ENST00000287814 ALPIP09923 528 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms