RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 BMP1P13497 986 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 GPX6P59796 221 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 ELAVL3Q14576 367 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 ARSIQ5FYB1 569 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 CEP85LQ5SZL2 805 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 GDPD4Q6W3E5 623 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 PIH1D2Q8WWB5 315 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 SPOCK2Q92563 424 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 TMEM109Q9BVC6 243 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 OSBPL1AQ9BXW6 950 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 SAMD15Q9P1V8 674 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 COL6A3P12111 3177 aa19.04■□□□□ 0.64
PDLIM3-202ENST00000284770 F5P12259 2224 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 OPA1O60313 960 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 CTSLP07711 333 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 POU6F1Q14863 301 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 FBXO43Q4G163 708 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 C2orf27AQ580R0 203 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 PCID2Q5JVF3 399 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 ARMC3Q5W041 872 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 STK40Q8N2I9 435 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 OR8D1Q8WZ84 308 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 PRSS16Q9NQE7 514 aa19.03■□□□□ 0.64
PDLIM3-202ENST00000284770 A0A1W2PQ67 120 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 PRNPP04156 253 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 TSHRP16473 764 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 PGAM1P18669 254 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 CD72P21854 359 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 NTSR1P30989 418 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 GRIA4P48058 902 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 EPHB1P54762 984 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 MRPS21P82921 87 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 PRKCQQ04759 706 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 CCINQ13939 588 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 QPCTQ16769 361 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 ZNF852Q6ZMS4 543 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 C3orf62Q6ZUJ4 267 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 KRT222Q8N1A0 295 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 PTCD2Q8WV60 388 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 ASB2Q96Q27 587 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 FAM129BQ96TA1 746 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 KIFC1Q9BW19 673 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 CHRAC1Q9NRG0 131 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 WNT16Q9UBV4 365 aa19.02■□□□□ 0.64
PDLIM3-202ENST00000284770 ADRA1DP25100 572 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 SLC8A1P32418 973 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 IFFO1Q0D2I5 559 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 HSP90B2PQ58FF3 399 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 SDE2Q6IQ49 451 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TRMT11Q7Z4G4 463 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PAF1Q8N7H5 531 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 IL17RCQ8NAC3 791 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TMIEQ8NEW7 156 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 HCAR2Q8TDS4 363 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 ARL8AQ96BM9 186 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 CFAP36Q96G28 342 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 KLHL32Q96NJ5 620 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 RANBP9Q96S59 729 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 GABRG3Q99928 467 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PLAC1Q9HBJ0 212 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 ARHGEF3Q9NR81 526 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PPM1HQ9ULR3 514 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 CA14Q9ULX7 337 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PHTF1Q9UMS5 762 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 SOX13Q9UN79 622 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 MYLKQ15746 1914 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 ANKRD36A6QL64 1941 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 A0A087WUV0 522 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 FAM237BA0A1B0GVD1 139 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 POLBP06746 335 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 SSTR1P30872 391 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 WASP42768 502 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 CAMK2GQ13555 558 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PKN3Q6P5Z2 889 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 BRAT1Q6PJG6 821 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 UNC5AQ6ZN44 842 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TMEM135Q86UB9 458 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 ZSWIM9Q86XI8 627 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 PPHLN1Q8NEY8 458 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 BRSK1Q8TDC3 778 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 BLOC1S5Q8TDH9 187 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TRIM56Q9BRZ2 755 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 VPS37BQ9H9H4 285 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TMBIM4Q9HC24 238 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 MRM3Q9HC36 420 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 TCAF1Q9Y4C2 921 aa19.01■□□□□ 0.63
PDLIM3-202ENST00000284770 A0A0J9YYE9 177 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 HEATR9A2RTY3 570 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 SPAG6O75602 509 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 TCEA3O75764 348 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 TRBC1P01850 177 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 PRKCGP05129 697 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 GSTA2P09210 222 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 PIRTP0C851 137 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 POLR2LP62875 67 aaKnown RBP19■□□□□ 0.63
PDLIM3-202ENST00000284770 TTMPQ5BVD1 217 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 ZNF805Q5CZA5 627 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 STEAP4Q687X5 459 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 CAPN12Q6ZSI9 719 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 DSG4Q86SJ6 1040 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms