RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MINDY1Q8N5J2 469 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TEX26Q8N6G2 289 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TTC13Q8NBP0 860 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ACTL9Q8TC94 416 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 NETO1Q8TDF5 533 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 HTR3CQ8WXA8 447 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 DNASE2BQ8WZ79 361 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 MAML1Q92585 1016 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RMDN1Q96DB5 314 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 IFT43Q96FT9 208 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 HES6Q96HZ4 224 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 QKIQ96PU8 341 aaKnown RBP eCLIP6.58□□□□□ -1.36
CD44-204ENST00000279452 RBM15Q96T37 977 aaKnown RBP eCLIP6.58□□□□□ -1.36
CD44-204ENST00000279452 HERPUD2Q9BSE4 406 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 C1QTNF7Q9BXJ2 289 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 SLC17A9Q9BYT1 436 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 GAREM1Q9H706 876 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 EBF2Q9HAK2 575 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RSPH14Q9UHP6 348 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ZFR2Q9UPR6 939 aaKnown RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 DMTF1Q9Y222 760 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CHKBQ9Y259 395 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ANKRD6Q9Y2G4 727 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CACNA1IQ9P0X4 2223 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 EML5Q05BV3 1969 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 DOCK4Q8N1I0 1966 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 A0A1W2PQ67 120 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TSPAN11A1L157 253 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 A6NNZ2 444 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 H0Y8X5 98 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TRAFD1O14545 582 aaPredicted RBP6.57□□□□□ -1.36
CD44-204ENST00000279452 ENC1O14682 589 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 RIOK3O14730 519 aaKnown RBP6.57□□□□□ -1.36
CD44-204ENST00000279452 WNT9AO14904 365 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 AREL1O15033 823 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 SPINT1O43278 529 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 LATO43561 262 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CEP104O60308 925 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 MAGEC1O60732 1142 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 OPHN1O60890 802 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PMPCBO75439 489 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PGLSO95336 258 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CER1O95813 267 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ALPIP09923 528 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 THEGLP0DJG4 465 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 C7P10643 843 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CR2P20023 1033 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CES1P23141 567 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 RBL1P28749 1068 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 VIPR1P32241 457 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CXCR5P32302 372 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PTPN7P35236 360 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 NUDT1P36639 197 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 MMP12P39900 470 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 LIG3P49916 1009 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 SUOXP51687 545 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 NIPAL4Q0D2K0 466 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 SNX1Q13596 522 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PRPSAP1Q14558 356 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 KIF19Q2TAC6 998 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 HLA-BQ31612 363 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TMEM259Q4ZIN3 620 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TEX44Q53QW1 395 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 STPG1Q5TH74 334 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 MEI1Q5TIA1 1274 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PEAR1Q5VY43 1037 aaPredicted RBP6.57□□□□□ -1.36
CD44-204ENST00000279452 ITPRIPL1Q6GPH6 555 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 IL27RAQ6UWB1 636 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ARHGEF18Q6ZSZ5 1173 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ZSCAN30Q86W11 494 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TAB3Q8N5C8 712 aaPredicted RBP6.57□□□□□ -1.36
CD44-204ENST00000279452 IPMKQ8NFU5 416 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 SPATA22Q8NHS9 363 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ARRDC2Q8TBH0 407 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 HCAR2Q8TDS4 363 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ATG4AQ8WYN0 398 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 FATE1Q969F0 183 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 FAM131CQ96AQ9 280 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 KLHDC7BQ96G42 594 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 IL12RB2Q99665 862 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 FSD1LQ9BXM9 530 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TDRD1Q9BXT4 1180 aaKnown RBP6.57□□□□□ -1.36
CD44-204ENST00000279452 ADGRE3Q9BY15 652 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 ZDHHC5Q9C0B5 715 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 GLOD4Q9HC38 313 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PCDH9Q9HC56 1237 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 CAPN10Q9HC96 672 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 GDF3Q9NR23 364 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 UBP1Q9NZI7 540 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 B4GALT6Q9UBX8 382 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 AMACRQ9UHK6 382 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 PHTF1Q9UMS5 762 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 EFR3BQ9Y2G0 817 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 SNX11Q9Y5W9 270 aa6.57□□□□□ -1.36
CD44-204ENST00000279452 TRIOO75962 3097 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 MUC6Q6W4X9 2439 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 A0A0U1RQS6 177 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TCRBV7S2A1N4TA0A589 114 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 NPIPB15A6NHN6 443 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms