RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 RTL3Q8N8U3 475 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 KYQ8NBH2 561 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 CCDC3Q9BQI4 270 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 WRAP53Q9BUR4 548 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 TTYH3Q9C0H2 523 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 VPS16Q9H269 839 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 HSD3B7Q9H2F3 369 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 NLRC4Q9NPP4 1024 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 FAM207AQ9NSI2 230 aaPredicted RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 MFHAS1Q9Y4C4 1052 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 ANKRD36A6QL64 1941 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 RASA4BC9J798 803 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 H3BM21 787 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 J3KR12 359 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 KLK10O43240 276 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 RASA4O43374 803 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 NOBOXO60393 691 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 POP4O95707 220 aaKnown RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 EEF1GP26641 437 aaKnown RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 DUSP3P51452 185 aaPredicted RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 TMPRSS3P57727 454 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SNRPD1P62314 119 aaKnown RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 RALGDSQ12967 914 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SGCGQ13326 291 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SERINC3Q13530 473 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 NR0B2Q15466 257 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 CA9Q16790 459 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 HS1BP3Q53T59 392 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 KIAA1614Q5VZ46 1190 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 RBM44Q6ZP01 1051 aaKnown RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 CYP4V2Q6ZWL3 525 aaPredicted RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 CLEC14AQ86T13 490 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 TTC7BQ86TV6 843 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 ZSCAN30Q86W11 494 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PHF13Q86YI8 300 aaPredicted RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 TP53INP2Q8IXH6 220 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PLA2G15Q8NCC3 412 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PCDH19Q8TAB3 1148 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 ENOX1Q8TC92 643 aaKnown RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 TSACCQ96A04 125 aaPredicted RBP9.04□□□□□ -0.96
TPM3-201ENST00000271850 PDXPQ96GD0 296 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 TBATAQ96M53 351 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 GDAP1L1Q96MZ0 367 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PEBP4Q96S96 227 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 LRRC19Q9H756 370 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 TMEM51Q9NW97 253 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 GPATCH2LQ9NWQ4 482 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 TAS2R14Q9NYV8 317 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 DKK3Q9UBP4 350 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 FZD10Q9ULW2 581 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 OR1A2Q9Y585 309 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 PCDHGA8Q9Y5G5 932 aa9.04□□□□□ -0.96
TPM3-201ENST00000271850 SIGLEC16A6NMB1 481 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 K7ENP7 123 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 PES1O00541 588 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 NEMP1O14524 444 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 BUB1O43683 1085 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 TCEA3O75764 348 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 TM7SF2O76062 418 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 KRT3P12035 628 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 C6P13671 934 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 HGFP14210 728 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 GPD1P21695 349 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 EPHB2P29323 1055 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 ETFBP38117 255 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 MMP12P39900 470 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 HK3P52790 923 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 YPEL5P62699 121 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 ARL13BQ3SXY8 428 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 INO80DQ53TQ3 878 aaPredicted RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 INO80CQ6PI98 192 aaPredicted RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 ARHGAP36Q6ZRI8 547 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 RBM43Q6ZSC3 357 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 SLFN11Q7Z7L1 901 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 ARHGAP12Q8IWW6 846 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 LSMEM2Q8N112 164 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 UMODL1-AS1Q8N2C9 162 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 NPWQ8N729 165 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 CXorf40AQ8TE69 158 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 CCDC74AQ96AQ1 378 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 CELF6Q96J87 481 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 MCEEQ96PE7 176 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 IL12RB2Q99665 862 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 CPEB1Q9BZB8 566 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 TRIM7Q9C029 511 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 ABCG4Q9H172 646 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 RETREG1Q9H6L5 497 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 THSD1Q9NS62 852 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 ADAM22Q9P0K1 906 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 SIRPGQ9P1W8 387 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms