RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ATP13A1Q9HD20 1204 aa12.99□□□□□ -0.33
CPSF6-201ENST00000266679 TMEM248Q9NWD8 314 aa12.99□□□□□ -0.33
CPSF6-201ENST00000266679 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
CPSF6-201ENST00000266679 CORO1CQ9ULV4 474 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-201ENST00000266679 POMPQ9Y244 141 aa12.99□□□□□ -0.33
CPSF6-201ENST00000266679 FIS1Q9Y3D6 152 aa12.99□□□□□ -0.33
CPSF6-201ENST00000266679 TRIM43BA6NCK2 446 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 THRAP10827 490 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ITGB8P26012 769 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 PPARGP37231 505 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 KPNA2P52292 529 aaKnown RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 DSG1Q02413 1049 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SH2D4BQ5SQS7 431 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SLC24A5Q71RS6 500 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 Q7L0L9 218 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 PTAR1Q7Z6K3 402 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 DHDDSQ86SQ9 333 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 PCSK9Q8NBP7 692 aaKnown RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 TRIM43Q96BQ3 446 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 FUBP3Q96I24 572 aaKnown RBP eCLIP12.98□□□□□ -0.336e-7■■■■□ 22.1
CPSF6-201ENST00000266679 CLIC5Q9NZA1 410 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 FNIP2Q9P278 1114 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 A0A1W2PPC1 479 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 DPPA5A6NC42 116 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 TMEM189-UBE2V1I3L0A0 370 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 BUD23O43709 281 aaKnown RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 NPHS1O60500 1241 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 GJB3O75712 270 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ATP5F1P24539 256 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
CPSF6-201ENST00000266679 CLCN5P51795 746 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ACLYP53396 1101 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 CDC16Q13042 620 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 TECRLQ5HYJ1 363 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 FBXL22Q6P050 247 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 TRIM67Q6ZTA4 783 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 PGBD5Q8N414 524 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 OR13J1Q8NGT2 312 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 JADE3Q92613 823 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 RCN3Q96D15 328 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ZNF385DQ9H6B1 395 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 ARNT2Q9HBZ2 717 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 PRKAG2Q9UGJ0 569 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SUFUQ9UMX1 484 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
CPSF6-201ENST00000266679 SLC12A8A0AV02 714 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 OR51F1A6NGY5 319 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 SLCO1B7G3V0H7 640 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 EOMESO95936 686 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 HNRNPLP14866 589 aaKnown RBP eCLIP12.97□□□□□ -0.336e-8■■■□□ 16.3
CPSF6-201ENST00000266679 YWHAQP27348 245 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 MTTPP55157 894 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CYLC2Q14093 348 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 TRIP4Q15650 581 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 SIRPB2Q5JXA9 342 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 RNF111Q6ZNA4 994 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 RPS27LQ71UM5 84 aaKnown RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 KDM1BQ8NB78 822 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 OR6P1Q8NGX9 317 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CALML6Q8TD86 181 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 BADQ92934 168 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CNDP1Q96KN2 507 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CCDC28BQ9BUN5 200 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 DLGAP2Q9P1A6 1054 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 UXTQ9UBK9 157 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CCDC166P0CW27 439 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 RAG1P15918 1043 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 KCNA5P22460 613 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 ACVRL1P37023 503 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 ARSDP51689 593 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 PLK1P53350 603 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 TAF10Q12962 218 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 LRRC36Q1X8D7 754 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 EML3Q32P44 896 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 C16orf89Q6UX73 402 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 CPSF7Q8N684 471 aaKnown RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 MYEOVQ96EZ4 313 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 RPRD1AQ96P16 312 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 SEPT5Q99719 369 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 SUDS3Q9H7L9 328 aaPredicted RBP12.97□□□□□ -0.33
CPSF6-201ENST00000266679 STARD7Q9NQZ5 370 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 NCKIPSDQ9NZQ3 722 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 ADAMTS6Q9UKP5 1117 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms