RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 REXO4Q9GZR2 422 aaKnown RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 RAD21L1Q9H4I0 556 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 COQ6Q9Y2Z9 468 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 POMCP01189 267 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 TGFB3P10600 412 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 ALOX12P18054 663 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 CD86P42081 329 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 NOMO2Q5JPE7 1267 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 REP15Q6BDI9 236 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 NAPRTQ6XQN6 538 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 FAM35AQ86V20 835 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 QKIQ96PU8 341 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRF-201ENST00000265354 FANCEQ9HB96 536 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 ZFP14Q9HCL3 533 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 RIC8BQ9NVN3 520 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 WDR37Q9Y2I8 494 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 SOAT2O75908 522 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 SQLEQ14534 574 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 MYBPC3Q14896 1274 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 ZNF276Q8N554 614 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRF-201ENST00000265354 FBXL20Q96IG2 436 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 MRPL57Q9BQC6 102 aaKnown RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 CDC14AQ9UNH5 594 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 TMEM247A6NEH6 219 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 KPNA4O00629 521 aaPredicted RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 FFAR3O14843 346 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 GPR42O15529 346 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 SIX3O95343 332 aaPredicted RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 ZNF182P17025 639 aaPredicted RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 POU1F1P28069 291 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 GGT5P36269 586 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 CCDC142Q17RM4 750 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 FAM98BQ52LJ0 330 aaKnown RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
SRF-201ENST00000265354 EXOC2Q96KP1 924 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 SFMBT1Q9UHJ3 866 aa17.2■□□□□ 0.34
SRF-201ENST00000265354 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 ZNF37AP17032 561 aaPredicted RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 LBPP18428 481 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 EPHX2P34913 555 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TBC1D25Q3MII6 688 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TEX44Q53QW1 395 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 ANKS6Q68DC2 871 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 PTRHD1Q6GMV3 140 aaKnown RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 FBXL19Q6PCT2 694 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 B3GALNT2Q8NCR0 500 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 GPATCH1Q9BRR8 931 aaKnown RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 PRDM16Q9HAZ2 1276 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 SIX4Q9UIU6 781 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TTC24A2A3L6 582 aaPredicted RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 A8MX80 341 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 DLX3O60479 287 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 OR7A2PQ8NGA2 310 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 OR2T34Q8NGX1 318 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 OR2T3Q8NH03 318 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 SUN5Q8TC36 379 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 C12orf43Q96C57 262 aaKnown RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 EXD2Q9NVH0 621 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TRHDEQ9UKU6 1024 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 NCAM2O15394 837 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TMEM53Q6P2H8 277 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 CNSTQ6PJW8 725 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 EPGNQ6UW88 154 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
SRF-201ENST00000265354 AHI1Q8N157 1196 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 ADAM28Q9UKQ2 775 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 TLL2Q9Y6L7 1015 aa17.19■□□□□ 0.34
SRF-201ENST00000265354 DHRS4L1P0CG22 281 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 ADAM17P78536 824 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 C11orf91Q3C1V1 193 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 C15orf39Q6ZRI6 1047 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 GALNT5Q7Z7M9 940 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 HORMAD1Q86X24 394 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 APOBEC3FQ8IUX4 373 aaKnown RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 SLC22A9Q8IVM8 553 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 BORCS5Q969J3 196 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 COX4I2Q96KJ9 171 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 SMAD5Q99717 465 aaKnown RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 HGH1Q9BTY7 390 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 TRMT6Q9UJA5 497 aaKnown RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 ANKRD6Q9Y2G4 727 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■■■■■ 106.8
SRF-201ENST00000265354 CAPN14A8MX76 684 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 NADKO95544 446 aaPredicted RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 F9P00740 461 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 JAK1P23458 1154 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 PTPN3P26045 913 aa17.18■□□□□ 0.34
SRF-201ENST00000265354 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
SRF-201ENST00000265354 GRIK4Q16099 956 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms