RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 AP5B1Q2VPB7 878 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 NEPROQ6NW34 567 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TMEM220Q6QAJ8 160 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 UBE2R2Q712K3 238 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SLC22A9Q8IVM8 553 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 FNDC5Q8NAU1 212 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SMG8Q8ND04 991 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 METTL6Q8TCB7 284 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 RELTQ969Z4 430 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 C12orf66Q96MD2 445 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ZNF670Q9BS34 389 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 IL22Q9GZX6 179 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ADAMTS10Q9H324 1103 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SLC32A1Q9H598 525 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ARMC7Q9H6L4 198 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 APOBEC3GQ9HC16 384 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SYBUQ9NX95 663 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 WHRNQ9P202 907 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 PRKAG3Q9UGI9 489 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ZNF711Q9Y462 761 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 H0Y3Z8 333 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 RB1P06400 928 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 NEK3P51956 506 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TAS2R40P59535 323 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 VSNL1P62760 191 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SPIRE1Q08AE8 756 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TBX2Q13207 712 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 OSTM1Q86WC4 334 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 GKN2Q86XP6 184 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 OR56A4Q8NGH8 313 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 MAFAQ8NHW3 353 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TFAP2BQ92481 460 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SMARCD2Q92925 531 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 NAT9Q9BTE0 207 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 HERC2P3Q9BVR0 1158 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SLC12A4Q9UP95 1085 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TLR6Q9Y2C9 796 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 LOC100653049A0A140TA62 436 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 KRT34O76011 436 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 SEC24DO94855 1032 aaPredicted RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 HNRNPA1P09651 372 aaKnown RBP eCLIP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 CRABP2P29373 138 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ADSSP30520 456 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 FAAP100Q0VG06 881 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GSTA3Q16772 222 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 FIGNQ5HY92 759 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GDPD4Q6W3E5 623 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 UBE2Q2Q8WVN8 375 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 FOXP3Q9BZS1 431 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 PCDH18Q9HCL0 1135 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 C2orf78A6NCI8 922 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 FAM170BA6NMN3 283 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 CCL22O00626 93 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ERAL1O75616 437 aaKnown RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 USP1O94782 785 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 VNN1O95497 513 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 EPORP19235 508 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ITGAXP20702 1163 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 SSTR1P30872 391 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 HPCAL1P37235 193 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 AIF1P55008 147 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 SKOR1P84550 965 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GPR17Q13304 367 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 CTBP1Q13363 440 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ZSCAN26Q16670 478 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 COLEC12Q5KU26 742 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 RTP2Q5QGT7 225 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 CAPRIN2Q6IMN6 1127 aaKnown RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ZCCHC8Q6NZY4 707 aaKnown RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 RNF44Q7L0R7 432 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 COMMD2Q86X83 199 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GATAD2AQ86YP4 633 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 LRRC49Q8IUZ0 686 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 BBS7Q8IWZ6 715 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 CENPLQ8N0S6 344 aaPredicted RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 RBFAQ8N0V3 343 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 PCYOX1LQ8NBM8 494 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 PMEPA1Q969W9 287 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 LINGO1Q96FE5 620 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 DPYSL5Q9BPU6 564 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 DPY30Q9C005 99 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GANQ9H2C0 597 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ELAC1Q9H777 363 aaKnown RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GID8Q9NWU2 228 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 MIOSQ9NXC5 875 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ABI3Q9P2A4 366 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 COL2A1P02458 1487 aaPredicted RBP6.38□□□□□ -1.39
BRIP1-201ENST00000259008 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 NEMP2A6NFY4 417 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 TMEM114B3SHH9 223 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 EPHB6O15197 1021 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ZNF682O95780 498 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 FGF1P05230 155 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 PSMC3P17980 439 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 GHRHRQ02643 423 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 NDUFA9Q16795 377 aa6.38□□□□□ -1.39
BRIP1-201ENST00000259008 ZDHHC20Q5W0Z9 365 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms