RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 TMEM74Q96NL1 305 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 ITM2CQ9NQX7 267 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 PKD2L2Q9NZM6 624 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 AASSQ9UDR5 926 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 KLQ9UEF7 1012 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 ZNF229Q9UJW7 825 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
SDC1-201ENST00000254351 CABYRO75952 493 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 MT-CYBP00156 380 aaPredicted RBP14.45□□□□□ -0.1
SDC1-201ENST00000254351 INHBBP09529 407 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 IST1P53990 364 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 DPYSL2Q16555 572 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 RWDD4Q6NW29 188 aaKnown RBP14.45□□□□□ -0.1
SDC1-201ENST00000254351 SCIMPQ6UWF3 145 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 SDCCAG3Q96C92 435 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 RNF145Q96MT1 663 aa14.45□□□□□ -0.1
SDC1-201ENST00000254351 NOL6Q9H6R4 1146 aaKnown RBP14.45□□□□□ -0.1
SDC1-201ENST00000254351 AP3B1O00203 1094 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 MDM4O15151 490 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 AQP9O43315 295 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 TIMM44O43615 452 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 BAIAP3O94812 1187 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 MYO1DO94832 1006 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 JCHAINP01591 159 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 PABPC1P11940 636 aaKnown RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 MYF6P23409 242 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 SLC12A2P55011 1212 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ANKRD34AQ69YU3 496 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CCDC80Q76M96 950 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CUZD1Q86UP6 607 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ZC3HC1Q86WB0 502 aaKnown RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 IPMKQ8NFU5 416 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 RNF139Q8WU17 664 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CCDC138Q96M89 665 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 IL12RB2Q99665 862 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CDHR5Q9HBB8 845 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 PRDM8Q9NQV8 689 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 VTI1BQ9UEU0 232 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 BTRCQ9Y297 605 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CITO14578 2027 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 FAM95CA0A1B0GW59 222 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 S100BP04271 92 aaPredicted RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 UBA1P22314 1058 aaKnown RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 DCKP27707 260 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NR4A2P43354 598 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 TAS2R39P59534 338 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CREB5Q02930 508 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 SLC13A2Q13183 592 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 SLC12A1Q13621 1099 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 DGCR6Q14129 220 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 RPS6KA2Q15349 733 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 SLC36A3Q495N2 470 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 PAGE2BQ5JRK9 111 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ARMCX6Q7L4S7 300 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ITIH5Q86UX2 942 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ELMO1Q92556 727 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 EHD1Q9H4M9 534 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 TMEM134Q9H6X4 195 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NANOGQ9H9S0 305 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ATAD3AQ9NVI7 634 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 PNMA8BQ9ULN7 279 aaPredicted RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 LRRC14BA6NHZ5 514 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 TRPC5OSA6NMA1 111 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 MLNP12872 115 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 STMN1P16949 149 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 HPCAL1P37235 193 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NR2C2P49116 596 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NDUFV1P49821 464 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 PYCR3Q53H96 274 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NOMO2Q5JPE7 1267 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 RBM20Q5T481 1227 aaKnown RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 ESRP1Q6NXG1 681 aaKnown RBP14.44□□□□□ -0.1
SDC1-201ENST00000254351 LCLAT1Q6UWP7 414 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CLEC4FQ8N1N0 589 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ABHD11Q8NFV4 315 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 NUDT8Q8WV74 236 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 ITCHQ96J02 903 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 KCNA7Q96RP8 456 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 RAD21L1Q9H4I0 556 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 TBC1D13Q9NVG8 400 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 GIN1Q9NXP7 522 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 CPQQ9Y646 472 aa14.44□□□□□ -0.1
SDC1-201ENST00000254351 A0A0J9YYE9 177 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 SPATA31C2B4DYI2 1134 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 M0QYT0 321 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 CLPXO76031 633 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 EGFRP00533 1210 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 SEPHS1P49903 392 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 STX1BP61266 288 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 ZNF789Q5FWF6 425 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 FAM117BQ6P1L5 589 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 ZFP90Q8TF47 636 aa14.43□□□□□ -0.1
SDC1-201ENST00000254351 STYXQ8WUJ0 223 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms