RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SULT2A1Q06520 285 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 TRIP4Q15650 581 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 HECTD2Q5U5R9 776 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 HDAC10Q969S8 669 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 UBXN10Q96LJ8 280 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 CRISPLD1Q9H336 500 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 GTSE1Q9NYZ3 720 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 MARCH2Q9P0N8 246 aa19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 MARCH4Q9P2E8 410 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP1-201ENST00000249014 LTA4HP09960 611 aaKnown RBP19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 ARSAP15289 507 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 RAG1P15918 1043 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 PLK1P53350 603 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 ARPP19P56211 112 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 TAF10Q12962 218 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLC14A2Q15849 920 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 AGAP9Q5VTM2 703 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 FAM171A1Q5VUB5 890 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 TMEM207Q6UWW9 146 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 OR6P1Q8NGX9 317 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 PRPF19Q9UMS4 504 aaKnown RBP19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 FIS1Q9Y3D6 152 aa19.65■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLC7A4O43246 635 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 LDB2O43679 373 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 S1PR4O95977 384 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 ADSLP30566 484 aaPredicted RBP19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 ACVRL1P37023 503 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 CDKN2DP55273 166 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 TNK2Q07912 1038 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 POLD3Q15054 466 aaPredicted RBP19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 C10orf120Q5SQS8 335 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 ARMC3Q5W041 872 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 C16orf89Q6UX73 402 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 FAM193BQ96PV7 902 aaPredicted RBP19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 CDRT15Q96T59 188 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 GPR62Q9BZJ7 368 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 STK39Q9UEW8 545 aa19.64■□□□□ 0.74
CDC42EP1-201ENST00000249014 LOC285095A0A1B0GVY8 99 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 SLC12A8A0AV02 714 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 DRGXA6NNA5 263 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 SYN3O14994 580 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 KIF1CO43896 1103 aaKnown RBP19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 RAMP2O60895 175 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 IPO13O94829 963 aaKnown RBP19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 PEX2P28328 305 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 DPP6P42658 865 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 THOP1P52888 689 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 MRPL58Q14197 206 aaKnown RBP19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 SFT2D3Q587I9 215 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 MAP3K21Q5TCX8 1036 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 FAM219BQ5XKK7 198 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 OR52E8Q6IFG1 317 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 RPRD1AQ96P16 312 aaPredicted RBP19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 MFSD1Q9H3U5 465 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 EBF3Q9H4W6 596 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 RNF186Q9NXI6 227 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 VWA7Q9Y334 891 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 TLL2Q9Y6L7 1015 aa19.64■□□□□ 0.73
CDC42EP1-201ENST00000249014 TRPC5OSA6NMA1 111 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 MUSKO15146 869 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 WISP3O95389 354 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 IGLV3-27P01718 113 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 IL10RBQ08334 325 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 SERINC3Q13530 473 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 EML3Q32P44 896 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PIGGQ5H8A4 983 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 NADSYN1Q6IA69 706 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 RSPO2Q6UXX9 243 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 GALNT7Q86SF2 657 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 SETD3Q86TU7 594 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PDSS2Q86YH6 399 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PHF21BQ96EK2 531 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 SCOCQ9UIL1 159 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 MAGEA13PA6NCF6 341 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 VNN2O95498 520 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 UBTFL6P0CB48 400 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 OR1E1P30953 314 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 MSX2P35548 267 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 KCNC1P48547 511 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PRAMEP78395 509 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PTPRCAPQ14761 206 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 HERC3Q15034 1050 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 GSTA3Q16772 222 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 ZNF423Q2M1K9 1284 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 BNC2Q6ZN30 1099 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PIM3Q86V86 326 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 PELI3Q8N2H9 469 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 GDPD5Q8WTR4 605 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 TSPAN17Q96FV3 270 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 SEMA3CQ99985 751 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 VCXQ9H320 206 aa19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 TLR8Q9NR97 1041 aaKnown RBP19.63■□□□□ 0.73
CDC42EP1-201ENST00000249014 TCAF2A6NFQ2 919 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 MAP3K13O43283 966 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 ENO3P13929 434 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 PKNOX1P55347 436 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 C1QTNF8P60827 252 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 ACAP2Q15057 778 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 GPR158Q5T848 1215 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 KLC3Q6P597 504 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms