RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZUFSPQ96AP4 578 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 NXF3Q9H4D5 531 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 RPF2Q9H7B2 306 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 UBQLN1Q9UMX0 589 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 MTF2Q9Y483 593 aaPredicted RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 YJEFN3A6XGL0 299 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 H3BMQ9 156 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 NME4O00746 187 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CACNG3O60359 315 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 AKAP5P24588 427 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 HMOX2P30519 316 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 ACADVLP49748 655 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SLC12A2P55011 1212 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 PMS2P3Q13401 168 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 VGLL4Q14135 290 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SLC36A3Q495N2 470 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 RBM20Q5T481 1227 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 ZNF470Q6ECI4 717 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CLEC6AQ6EIG7 209 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 RWDD4Q6NW29 188 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 GADL1Q6ZQY3 521 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 ANKRD23Q86SG2 305 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 C2CD4AQ8NCU7 369 aaPredicted RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 PHF21BQ96EK2 531 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 COG8Q96MW5 612 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 TBL1YQ9BQ87 522 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 PAIP1Q9H074 479 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 MRM3Q9HC36 420 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 AGPAT4Q9NRZ5 378 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 TRAF6Q9Y4K3 522 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SBF1O95248 1867 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 UBFD1O14562 309 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 PSMD3O43242 534 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SUPT3HO75486 399 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CLIC3O95833 236 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CPB1P15086 417 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 ETFBP38117 255 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 POU4F1Q01851 419 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 FAM83EQ2M2I3 478 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SLC44A4Q53GD3 710 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 LIMS2Q7Z4I7 341 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 SPPL2CQ8IUH8 684 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 IPMKQ8NFU5 416 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 ROPN1LQ96C74 230 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 CCDC126Q96EE4 140 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 THAP11Q96EK4 314 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 GPATCH1Q9BRR8 931 aaKnown RBP15.6■□□□□ 0.09
DDX55-201ENST00000238146 RHOBTB2Q9BYZ6 727 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 ULBP1Q9BZM6 244 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 GOLGA2P5Q9HBQ8 144 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 MAP10Q9P2G4 905 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 FBXO5Q9UKT4 447 aa15.6■□□□□ 0.09
DDX55-201ENST00000238146 DHRS12A0PJE2 317 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 GIPC1O14908 333 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 TPST1O60507 370 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 COQ9O75208 318 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 USP2O75604 605 aaPredicted RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 ALDOCP09972 364 aaKnown RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 MAP3K7CLP57077 242 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 TMEM62Q0P6H9 643 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 KCTD2Q14681 263 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 FASTKD5Q7L8L6 764 aaKnown RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 DOK1Q99704 481 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 OLFM1Q99784 485 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 IL1RL2Q9HB29 575 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 SLC38A7Q9NVC3 462 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 DDIT4Q9NX09 232 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 OR12D3Q9UGF7 316 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 BLOC1S6Q9UL45 172 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 AAR2Q9Y312 384 aaKnown RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 RNF103-CHMP3A0A140T963 221 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 A0A1W2PPW3 197 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 KANSL1LA0AUZ9 987 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 AQP12BA6NM10 295 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 NFKBIEO00221 500 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 HUS1O60921 280 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 CBFA2T3O75081 653 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 LRIG2O94898 1065 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 ZNF829Q3KNS6 432 aaPredicted RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 GPR107Q5VW38 600 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 ARHGAP36Q6ZRI8 547 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 AQP12AQ8IXF9 295 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 PCYOX1LQ8NBM8 494 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 PPHLN1Q8NEY8 458 aaKnown RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 ZNF420Q8TAQ5 688 aaPredicted RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 ZNF419Q96HQ0 510 aaPredicted RBP15.59■□□□□ 0.09
DDX55-201ENST00000238146 FBXL20Q96IG2 436 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 C3orf30Q96M34 536 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 GSTO2Q9H4Y5 243 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 TBC1D23Q9NUY8 699 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 KLK14Q9P0G3 267 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 EGFL7Q9UHF1 273 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 TCAF1Q9Y4C2 921 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 PCDHGA4Q9Y5G9 962 aa15.59■□□□□ 0.09
DDX55-201ENST00000238146 UTRNP46939 3433 aa15.58■□□□□ 0.09
DDX55-201ENST00000238146 SMIM28A0A1B0GU29 152 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms