RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 VPS39Q96JC1 886 aa16.89■□□□□ 0.29
TVP23C-201ENST00000225576 SRPK1Q96SB4 655 aaKnown RBP16.89■□□□□ 0.29
TVP23C-201ENST00000225576 TM6SF2Q9BZW4 377 aa16.89■□□□□ 0.29
TVP23C-201ENST00000225576 CEP44Q9C0F1 390 aa16.89■□□□□ 0.29
TVP23C-201ENST00000225576 MFSD1Q9H3U5 465 aa16.89■□□□□ 0.29
TVP23C-201ENST00000225576 SLC25A13Q9UJS0 675 aa16.89■□□□□ 0.29
TVP23C-201ENST00000225576 RPL26L1Q9UNX3 145 aaKnown RBP16.89■□□□□ 0.29
TVP23C-201ENST00000225576 TPP1O14773 563 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 HOXC11O43248 304 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 ADH1CP00326 375 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 AHSGP02765 367 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 CYP17A1P05093 508 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 PRKCGP05129 697 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 DHRS4L1P0CG22 281 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 CTSOP43234 321 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 ETV4P43268 484 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 SNRPD1P62314 119 aaKnown RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 QPCTQ16769 361 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 DGKKQ5KSL6 1271 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 ADIPOR2Q86V24 386 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 AHI1Q8N157 1196 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 OR2AP1Q8NGE2 309 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 HDAC10Q969S8 669 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 GPR22Q99680 433 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 HACD3Q9P035 362 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 SLC17A7Q9P2U7 560 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 EVLQ9UI08 416 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 GGT7Q9UJ14 662 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 FBXO5Q9UKT4 447 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 MTO1Q9Y2Z2 717 aaKnown RBP16.88■□□□□ 0.29
TVP23C-201ENST00000225576 PLLPQ9Y342 182 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 KCTD3Q9Y597 815 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 SPO11Q9Y5K1 396 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 ARL5AQ9Y689 179 aa16.88■□□□□ 0.29
TVP23C-201ENST00000225576 NDUFAB1O14561 156 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 LINC01565O15544 149 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 HTRA2O43464 458 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 SOCS5O75159 536 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 RPP40O75818 363 aaKnown RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 PGLSO95336 258 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 GSRP00390 522 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ADH5P11766 374 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 GABRB3P28472 473 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 TYK2P29597 1187 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 SERPINB8P50452 374 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ARSDP51689 593 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 PRAMEP78395 509 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ECT2LQ008S8 904 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 BCL2L1Q07817 233 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ILF2Q12905 390 aaKnown RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 CTBP1Q13363 440 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ARMC12Q5T9G4 340 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ZNF470Q6ECI4 717 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 RGS9BPQ6ZS82 235 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 ZNF771Q7L3S4 317 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 PCDH20Q8N6Y1 951 aaKnown RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 CABS1Q96KC9 395 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 RPL10LQ96L21 214 aaKnown RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 APOL5Q9BWW9 433 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 SLC13A1Q9BZW2 595 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 VPS11Q9H270 941 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 PCMTD2Q9NV79 361 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 NLE1Q9NVX2 485 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-201ENST00000225576 PCDHB9Q9Y5E1 797 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 SZT2Q5T011 3432 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 MIA3Q5JRA6 1907 aa16.87■□□□□ 0.29
TVP23C-201ENST00000225576 C2orf81A6NN90 581 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 HEPACAM2A8MVW5 462 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 TRAFD1O14545 582 aaPredicted RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 NFATC1O95644 943 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 MPOP05164 745 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PIRTP0C851 137 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 DRD4P21917 467 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 SLC1A2P43004 574 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 GRIA4P48058 902 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 STK19P49842 368 aaPredicted RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 ZNF140P52738 457 aaPredicted RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 ADAM15Q13444 863 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PDE1CQ14123 709 aaPredicted RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PDK4Q16654 411 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 INSCQ1MX18 579 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 MBLAC2Q68D91 279 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 C22orf39Q6P5X5 142 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 CDHR3Q6ZTQ4 885 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 GLT6D1Q7Z4J2 308 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 CAMK1DQ8IU85 385 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PLPP6Q8IY26 295 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 MDGA1Q8NFP4 955 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 GPR150Q8NGU9 434 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 OR6P1Q8NGX9 317 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PDCD6IPQ8WUM4 868 aaKnown RBP16.86■□□□□ 0.29
TVP23C-201ENST00000225576 PIH1D2Q8WWB5 315 aa16.86■□□□□ 0.29
TVP23C-201ENST00000225576 DNAJC1Q96KC8 554 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms