RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 NSUN2Q08J23 767 aaKnown RBP eCLIP29.86■■■□□ 2.37
PABPN1-201ENST00000216727 ZNF460Q14592 562 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 EBF4Q9BQW3 602 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 TLE6Q9H808 572 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 DNAJC28Q9NX36 388 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 SORCS3Q9UPU3 1222 aa29.86■■■□□ 2.37
PABPN1-201ENST00000216727 KIAA1671Q9BY89 1806 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 CAPN14A8MX76 684 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 FGF18O76093 207 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 SCNN1BP51168 640 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 RBM20Q5T481 1227 aaKnown RBP29.85■■■□□ 2.37
PABPN1-201ENST00000216727 Q6ZNB5 142 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 GPR150Q8NGU9 434 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 NXNL1Q96CM4 212 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 TSPAN17Q96FV3 270 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 SCYL1Q96KG9 808 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 GATA5Q9BWX5 397 aaPredicted RBP29.85■■■□□ 2.37
PABPN1-201ENST00000216727 PNPOQ9NVS9 261 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 ARL5AQ9Y689 179 aa29.85■■■□□ 2.37
PABPN1-201ENST00000216727 ATP6V1G2O95670 118 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 S1PR4O95977 384 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 HDCP19113 662 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 DLG1Q12959 904 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 ARL14EPQ8N8R7 260 aaPredicted RBP29.84■■■□□ 2.37
PABPN1-201ENST00000216727 HJURPQ8NCD3 748 aaPredicted RBP29.84■■■□□ 2.37
PABPN1-201ENST00000216727 TBATAQ96M53 351 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 NSMCE3Q96MG7 304 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 RILPQ96NA2 401 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 NUDCD1Q96RS6 583 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 TBC1D10AQ9BXI6 508 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 SCUBE2Q9NQ36 999 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 STK38LQ9Y2H1 464 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 ZNF195O14628 629 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 RPP40O75818 363 aaKnown RBP29.84■■■□□ 2.37
PABPN1-201ENST00000216727 HSPA4LO95757 839 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 GLRBP48167 497 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 ARF5P84085 180 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 TBCCQ15814 346 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 TXNDC8Q6A555 127 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 FAM217AQ8IXS0 508 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 MRPL46Q9H2W6 279 aaKnown RBP29.84■■■□□ 2.37
PABPN1-201ENST00000216727 OBSL1O75147 1896 aa29.84■■■□□ 2.37
PABPN1-201ENST00000216727 TBL1XO60907 577 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 CNPP09543 421 aaKnown RBP29.83■■■□□ 2.37
PABPN1-201ENST00000216727 TUBB3Q13509 450 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 DNAJC1Q96KC8 554 aaKnown RBP29.83■■■□□ 2.37
PABPN1-201ENST00000216727 OLFM1Q99784 485 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 MRPL57Q9BQC6 102 aaKnown RBP29.83■■■□□ 2.37
PABPN1-201ENST00000216727 TDRD1Q9BXT4 1180 aaKnown RBP29.83■■■□□ 2.37
PABPN1-201ENST00000216727 XPR1Q9UBH6 696 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 CPQQ9Y646 472 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 TGM5O43548 720 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 ZMPSTE24O75844 475 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 ZXDBP98169 803 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 MAVSQ7Z434 540 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 NDNQ99608 321 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 DRC3Q9H069 523 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 ARMCX1Q9P291 453 aa29.83■■■□□ 2.37
PABPN1-201ENST00000216727 MARCH4Q9P2E8 410 aaPredicted RBP29.83■■■□□ 2.37
PABPN1-201ENST00000216727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.82■■■□□ 2.36
PABPN1-201ENST00000216727 TYW5A2RUC4 315 aaKnown RBP29.82■■■□□ 2.36
PABPN1-201ENST00000216727 H0Y626 953 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 CCL22O00626 93 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 CRTAMO95727 393 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 GLP2RO95838 553 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 CD160O95971 181 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 SPATA31D3P0C874 917 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 HECTD2Q5U5R9 776 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 SPATA31D4Q6ZUB0 917 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 OTOP2Q7RTS6 562 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 TTC8Q8TAM2 541 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 IL23AQ9NPF7 189 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 APOBEC2Q9Y235 224 aaKnown RBP29.82■■■□□ 2.36
PABPN1-201ENST00000216727 VWA7Q9Y334 891 aa29.82■■■□□ 2.36
PABPN1-201ENST00000216727 PTPRSQ13332 1948 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 PRLP01236 227 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 LINC00271P0C7V0 271 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 MYL4P12829 197 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 INO80DQ53TQ3 878 aaPredicted RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 MRNIPQ6NTE8 343 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 HEXDCQ8WVB3 486 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 TMA16Q96EY4 203 aaKnown RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 EXOC2Q96KP1 924 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 BTBD10Q9BSF8 475 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 CDH19Q9H159 772 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 IGSF5Q9NSI5 407 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 CORO1CQ9ULV4 474 aaPredicted RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 LUC7L3O95232 432 aaKnown RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 GOT2P00505 430 aaKnown RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 ESRRAP11474 423 aaPredicted RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 ASPHQ12797 758 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 FAM83EQ2M2I3 478 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 FSCBQ5H9T9 825 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 NECAB2Q7Z6G3 386 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 CARNMT1Q8N4J0 409 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 MAGEC3Q8TD91 643 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 SCG3Q8WXD2 468 aaKnown RBP29.81■■■□□ 2.36
PABPN1-201ENST00000216727 FEM1AQ9BSK4 669 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 CCDC106Q9BWC9 280 aa29.81■■■□□ 2.36
PABPN1-201ENST00000216727 OR51B4Q9Y5P0 310 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms