RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 PCDH12Q9NPG4 1184 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 ENTPD2Q9Y5L3 495 aa16.01■□□□□ 0.15
ERCC1-201ENST00000013807 A0A1W2PNU3 283 aaPredicted RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 CPED1A4D0V7 1026 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 NTN3O00634 580 aaPredicted RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 TEX33O43247 280 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 MBD3O95983 291 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ANXA6P08133 673 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 HOXC4P09017 264 aaPredicted RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 C6P13671 934 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 PAPOLAP51003 745 aaKnown RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 CA9Q16790 459 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 PERM1Q5SV97 790 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 FAXCQ5TGI0 409 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ERAP2Q6P179 960 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 GPR155Q7Z3F1 870 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 SRLQ86TD4 932 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 CAMK1DQ8IU85 385 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 NETO2Q8NC67 525 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 TSEN2Q8NCE0 465 aaKnown RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 PRR11Q96HE9 360 aaPredicted RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 EXOC2Q96KP1 924 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 PEBP4Q96S96 227 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 WRAP53Q9BUR4 548 aaKnown RBP16■□□□□ 0.15
ERCC1-201ENST00000013807 APOOQ9BUR5 198 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 DPH1Q9BZG8 443 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 DGKBQ9Y6T7 804 aa16■□□□□ 0.15
ERCC1-201ENST00000013807 ZFC3H1O60293 1989 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 A0A1W2PQC6 194 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 EEF2KO00418 725 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 TRAFD1O14545 582 aaPredicted RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 RNF8O76064 485 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 PIGNO95427 931 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ALPIP09923 528 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ERCC2P18074 760 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 XPAP23025 273 aaPredicted RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 PSMA2P25787 234 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 TRIM23P36406 574 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 RGRP47804 291 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 LIG3P49916 1009 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 UCNP55089 124 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 TYRO3Q06418 890 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 IL10RBQ08334 325 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 MTM1Q13496 603 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 C1orf61Q13536 156 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 INPP5AQ14642 412 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 NFATC4Q14934 902 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ELOCQ15369 112 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ALG11Q2TAA5 492 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 RBM44Q6ZP01 1051 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 RFX8Q6ZV50 586 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ZSWIM9Q86XI8 627 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 LZTR1Q8N653 840 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ATL2Q8NHH9 583 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 SCG3Q8WXD2 468 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 SNRNP25Q9BV90 132 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 NAT10Q9H0A0 1025 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
ERCC1-201ENST00000013807 ATP13A3Q9H7F0 1226 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 THSD1Q9NS62 852 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 PADI4Q9UM07 663 aa15.99■□□□□ 0.15
ERCC1-201ENST00000013807 LRRC53A6NM62 1247 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 CDRT15L2A8MXV6 281 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 PALMO75781 387 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 RASGRP1O95267 797 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 HTR1BP28222 390 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 SERPINA4P29622 427 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 MIPP30301 263 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 PCK1P35558 622 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 POLR2LP62875 67 aaKnown RBP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 CCDC173Q0VFZ6 552 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 ESRP1Q6NXG1 681 aaKnown RBP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 ZNF571Q7Z3V5 609 aaPredicted RBP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 OR6C4Q8NGE1 309 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 ATXN7L3BQ96GX2 97 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 CELF6Q96J87 481 aaKnown RBP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 ZNF599Q96NL3 588 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 PSKH2Q96QS6 385 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 RBM15Q96T37 977 aaKnown RBP eCLIP15.98■□□□□ 0.15
ERCC1-201ENST00000013807 LGMNQ99538 433 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 HAUS4Q9H6D7 363 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 GPATCH2LQ9NWQ4 482 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 COQ6Q9Y2Z9 468 aa15.98■□□□□ 0.15
ERCC1-201ENST00000013807 TNFRSF10CO14798 259 aa15.97■□□□□ 0.15
ERCC1-201ENST00000013807 MUSKO15146 869 aa15.97■□□□□ 0.15
ERCC1-201ENST00000013807 LRCH4O75427 683 aa15.97■□□□□ 0.15
ERCC1-201ENST00000013807 FTLP02792 175 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-201ENST00000013807 PDX1P52945 283 aa15.97■□□□□ 0.15
ERCC1-201ENST00000013807 RALGDSQ12967 914 aa15.97■□□□□ 0.15
ERCC1-201ENST00000013807 DPYSQ14117 519 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms