RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
PHGDH-208ENST00000641023 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
PHGDH-208ENST00000641023 CRBNQ96SW2 442 aa22.4■■□□□ 1.18
PHGDH-208ENST00000641023 CALD1Q05682 793 aaKnown RBP22.39■■□□□ 1.17
PHGDH-208ENST00000641023 SULT6B1Q6IMI4 303 aa22.39■■□□□ 1.17
PHGDH-208ENST00000641023 ORAI2Q96SN7 254 aa22.39■■□□□ 1.17
PHGDH-208ENST00000641023 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
PHGDH-208ENST00000641023 FANCIQ9NVI1 1328 aa22.39■■□□□ 1.17
PHGDH-208ENST00000641023 LMOD3Q0VAK6 560 aa22.38■■□□□ 1.17
PHGDH-208ENST00000641023 C20orf194Q5TEA3 1177 aa22.38■■□□□ 1.17
PHGDH-208ENST00000641023 NCOA3Q9Y6Q9 1424 aa22.38■■□□□ 1.17
PHGDH-208ENST00000641023 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
PHGDH-208ENST00000641023 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
PHGDH-208ENST00000641023 FOXO3O43524 673 aa22.37■■□□□ 1.17
PHGDH-208ENST00000641023 ATF3P18847 181 aa22.37■■□□□ 1.17
PHGDH-208ENST00000641023 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
PHGDH-208ENST00000641023 AEBP1Q8IUX7 1158 aa22.35■■□□□ 1.17
PHGDH-208ENST00000641023 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
PHGDH-208ENST00000641023 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
PHGDH-208ENST00000641023 ARHGEF10O15013 1369 aa22.34■■□□□ 1.17
PHGDH-208ENST00000641023 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
PHGDH-208ENST00000641023 KCNH5Q8NCM2 988 aa22.34■■□□□ 1.17
PHGDH-208ENST00000641023 DCCP43146 1447 aa22.33■■□□□ 1.17
PHGDH-208ENST00000641023 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
PHGDH-208ENST00000641023 HOXC9P31274 260 aa22.33■■□□□ 1.17
PHGDH-208ENST00000641023 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.17
PHGDH-208ENST00000641023 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
PHGDH-208ENST00000641023 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.17
PHGDH-208ENST00000641023 RGPD1P0DJD0 1748 aa22.32■■□□□ 1.16
PHGDH-208ENST00000641023 RTL1A6NKG5 1358 aa22.3■■□□□ 1.16
PHGDH-208ENST00000641023 GNAI1P63096 354 aa22.3■■□□□ 1.16
PHGDH-208ENST00000641023 CADPS2Q86UW7 1296 aa22.3■■□□□ 1.16
PHGDH-208ENST00000641023 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
PHGDH-208ENST00000641023 STRCP1A6NGW2 1772 aa22.29■■□□□ 1.16
PHGDH-208ENST00000641023 KRT28Q7Z3Y7 464 aa22.29■■□□□ 1.16
PHGDH-208ENST00000641023 FRAT1Q92837 279 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-208ENST00000641023 IFT57Q9NWB7 429 aa22.29■■□□□ 1.16
PHGDH-208ENST00000641023 IGSF1Q8N6C5 1336 aa22.29■■□□□ 1.16
PHGDH-208ENST00000641023 EYA1Q99502 592 aa22.29■■□□□ 1.16
PHGDH-208ENST00000641023 KDRP35968 1356 aa22.28■■□□□ 1.16
PHGDH-208ENST00000641023 XPCQ01831 940 aaPredicted RBP22.28■■□□□ 1.16
PHGDH-208ENST00000641023 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
PHGDH-208ENST00000641023 MST1RQ04912 1400 aa22.27■■□□□ 1.16
PHGDH-208ENST00000641023 THUMPD2Q9BTF0 503 aaKnown RBP22.27■■□□□ 1.16
PHGDH-208ENST00000641023 MSH6P52701 1360 aa22.26■■□□□ 1.15
PHGDH-208ENST00000641023 LMOD2Q6P5Q4 547 aa22.26■■□□□ 1.15
PHGDH-208ENST00000641023 IP6K1Q92551 441 aa22.26■■□□□ 1.15
PHGDH-208ENST00000641023 CFAP44Q96MT7 982 aa22.26■■□□□ 1.15
PHGDH-208ENST00000641023 BCL2L13Q9BXK5 485 aa22.26■■□□□ 1.15
PHGDH-208ENST00000641023 ZNF428Q96B54 188 aa22.25■■□□□ 1.15
PHGDH-208ENST00000641023 ZNF853P0CG23 659 aa22.24■■□□□ 1.15
PHGDH-208ENST00000641023 DLG5Q8TDM6 1919 aa22.24■■□□□ 1.15
PHGDH-208ENST00000641023 NFAT5O94916 1531 aa22.24■■□□□ 1.15
PHGDH-208ENST00000641023 GCP02774 474 aa22.24■■□□□ 1.15
PHGDH-208ENST00000641023 FAM83GA6ND36 823 aa22.23■■□□□ 1.15
PHGDH-208ENST00000641023 SMC4Q9NTJ3 1288 aa22.23■■□□□ 1.15
PHGDH-208ENST00000641023 STRCQ7RTU9 1775 aa22.22■■□□□ 1.15
PHGDH-208ENST00000641023 MS4A1P11836 297 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 LTV1Q96GA3 475 aaPredicted RBP22.21■■□□□ 1.15
PHGDH-208ENST00000641023 LTN1O94822 1766 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 DCTN1Q14203 1278 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 GAS2L2Q8NHY3 880 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 SSH1Q8WYL5 1049 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
PHGDH-208ENST00000641023 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
PHGDH-208ENST00000641023 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
PHGDH-208ENST00000641023 USP19O94966 1318 aa22.19■■□□□ 1.14
PHGDH-208ENST00000641023 NPHP3Q7Z494 1330 aa22.19■■□□□ 1.14
PHGDH-208ENST00000641023 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
PHGDH-208ENST00000641023 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
PHGDH-208ENST00000641023 SLIT3O75094 1523 aa22.19■■□□□ 1.14
PHGDH-208ENST00000641023 AAMPQ13685 434 aa22.18■■□□□ 1.14
PHGDH-208ENST00000641023 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
PHGDH-208ENST00000641023 ZBTB7CA1YPR0 619 aa22.18■■□□□ 1.14
PHGDH-208ENST00000641023 KIF16BQ96L93 1317 aa22.17■■□□□ 1.14
PHGDH-208ENST00000641023 MCM10Q7L590 875 aa22.16■■□□□ 1.14
PHGDH-208ENST00000641023 PHRF1Q9P1Y6 1649 aaKnown RBP22.16■■□□□ 1.14
PHGDH-208ENST00000641023 VAMP4O75379 141 aa22.16■■□□□ 1.14
PHGDH-208ENST00000641023 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
PHGDH-208ENST00000641023 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
PHGDH-208ENST00000641023 HTATSF1O43719 755 aaKnown RBP22.15■■□□□ 1.14
PHGDH-208ENST00000641023 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
PHGDH-208ENST00000641023 DZIP1LQ8IYY4 767 aaKnown RBP22.15■■□□□ 1.14
PHGDH-208ENST00000641023 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
PHGDH-208ENST00000641023 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
PHGDH-208ENST00000641023 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.13
PHGDH-208ENST00000641023 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.13
PHGDH-208ENST00000641023 CHL1O00533 1208 aa22.13■■□□□ 1.13
PHGDH-208ENST00000641023 RLBP1P12271 317 aa22.13■■□□□ 1.13
PHGDH-208ENST00000641023 HAP1P54257 671 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-208ENST00000641023 TWISTNBQ3B726 338 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-208ENST00000641023 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
PHGDH-208ENST00000641023 NOB1Q9ULX3 412 aaKnown RBP22.13■■□□□ 1.13
PHGDH-208ENST00000641023 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
PHGDH-208ENST00000641023 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
PHGDH-208ENST00000641023 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
PHGDH-208ENST00000641023 DDX17Q92841 729 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms