RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
SCARB2-223ENST00000640640 PSMA5P28066 241 aa21.21■□□□□ 0.99
SCARB2-223ENST00000640640 CABP4P57796 275 aa21.21■□□□□ 0.99
SCARB2-223ENST00000640640 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.21■□□□□ 0.99
SCARB2-223ENST00000640640 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
SCARB2-223ENST00000640640 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
SCARB2-223ENST00000640640 PRDM11Q9NQV5 511 aa21.21■□□□□ 0.99
SCARB2-223ENST00000640640 TRIM27P14373 513 aa21.2■□□□□ 0.98
SCARB2-223ENST00000640640 CREBRFQ8IUR6 639 aa21.2■□□□□ 0.98
SCARB2-223ENST00000640640 ZNF518AQ6AHZ1 1483 aa21.19■□□□□ 0.98
SCARB2-223ENST00000640640 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
SCARB2-223ENST00000640640 DNAJC2Q99543 621 aaKnown RBP21.19■□□□□ 0.98
SCARB2-223ENST00000640640 PZPP20742 1482 aa21.19■□□□□ 0.98
SCARB2-223ENST00000640640 HIP1O00291 1037 aa21.19■□□□□ 0.98
SCARB2-223ENST00000640640 MYL6BP14649 208 aa21.19■□□□□ 0.98
SCARB2-223ENST00000640640 DDX54Q8TDD1 881 aaKnown RBP21.18■□□□□ 0.98
SCARB2-223ENST00000640640 IL1RAPL2Q9NP60 686 aa21.18■□□□□ 0.98
SCARB2-223ENST00000640640 EXOC6BQ9Y2D4 811 aa21.18■□□□□ 0.98
SCARB2-223ENST00000640640 ANKRD36BQ8N2N9 1353 aa21.18■□□□□ 0.98
SCARB2-223ENST00000640640 SIL1Q9H173 461 aa21.17■□□□□ 0.98
SCARB2-223ENST00000640640 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
SCARB2-223ENST00000640640 FYB1O15117 783 aa21.17■□□□□ 0.98
SCARB2-223ENST00000640640 NFXL1Q6ZNB6 911 aa21.17■□□□□ 0.98
SCARB2-223ENST00000640640 ASXL1Q8IXJ9 1541 aa21.17■□□□□ 0.98
SCARB2-223ENST00000640640 ARID3AQ99856 593 aa21.16■□□□□ 0.98
SCARB2-223ENST00000640640 NOL10Q9BSC4 688 aaKnown RBP21.16■□□□□ 0.98
SCARB2-223ENST00000640640 DNMT1P26358 1616 aaKnown RBP21.16■□□□□ 0.98
SCARB2-223ENST00000640640 CLSTN1O94985 981 aa21.16■□□□□ 0.98
SCARB2-223ENST00000640640 FBLN1P23142 703 aa21.16■□□□□ 0.98
SCARB2-223ENST00000640640 K7ELQ4 463 aaPredicted RBP21.15■□□□□ 0.98
SCARB2-223ENST00000640640 MRE11P49959 708 aa21.15■□□□□ 0.98
SCARB2-223ENST00000640640 MSH5O43196 834 aa21.15■□□□□ 0.98
SCARB2-223ENST00000640640 FOXO3O43524 673 aa21.15■□□□□ 0.98
SCARB2-223ENST00000640640 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
SCARB2-223ENST00000640640 MARCH6O60337 910 aa21.14■□□□□ 0.98
SCARB2-223ENST00000640640 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.98
SCARB2-223ENST00000640640 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.98
SCARB2-223ENST00000640640 AMOTL1Q8IY63 956 aa21.14■□□□□ 0.97
SCARB2-223ENST00000640640 FOSBP53539 338 aa21.14■□□□□ 0.97
SCARB2-223ENST00000640640 KIF6Q6ZMV9 814 aa21.14■□□□□ 0.97
SCARB2-223ENST00000640640 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.97
SCARB2-223ENST00000640640 FAM177BA6PVY3 158 aa21.13■□□□□ 0.97
SCARB2-223ENST00000640640 ERICH2A1L162 156 aa21.13■□□□□ 0.97
SCARB2-223ENST00000640640 PER1O15534 1290 aaPredicted RBP21.13■□□□□ 0.97
SCARB2-223ENST00000640640 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
SCARB2-223ENST00000640640 ACEP12821 1306 aa21.12■□□□□ 0.97
SCARB2-223ENST00000640640 CAVIN1Q6NZI2 390 aaKnown RBP21.12■□□□□ 0.97
SCARB2-223ENST00000640640 MAP4K4O95819 1239 aaPredicted RBP21.11■□□□□ 0.97
SCARB2-223ENST00000640640 MBD3O95983 291 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 PDCP20941 246 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 CCDC73Q6ZRK6 1079 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 F6X3S4 739 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 PRPF40AO75400 957 aaKnown RBP21.11■□□□□ 0.97
SCARB2-223ENST00000640640 IL16Q14005 1332 aa21.11■□□□□ 0.97
SCARB2-223ENST00000640640 CWC22Q9HCG8 908 aaKnown RBP21.1■□□□□ 0.97
SCARB2-223ENST00000640640 AACSQ86V21 672 aa21.1■□□□□ 0.97
SCARB2-223ENST00000640640 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
SCARB2-223ENST00000640640 SAMD9Q5K651 1589 aa21.1■□□□□ 0.97
SCARB2-223ENST00000640640 TPD52L1Q16890 204 aaPredicted RBP21.09■□□□□ 0.97
SCARB2-223ENST00000640640 CCDC27Q2M243 656 aa21.09■□□□□ 0.97
SCARB2-223ENST00000640640 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
SCARB2-223ENST00000640640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.09■□□□□ 0.97
SCARB2-223ENST00000640640 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
SCARB2-223ENST00000640640 NASPP49321 788 aaPredicted RBP21.09■□□□□ 0.97
SCARB2-223ENST00000640640 SASS6Q6UVJ0 657 aa21.09■□□□□ 0.97
SCARB2-223ENST00000640640 ADGRL2O95490 1459 aa21.08■□□□□ 0.97
SCARB2-223ENST00000640640 CYP46A1Q9Y6A2 500 aa21.08■□□□□ 0.97
SCARB2-223ENST00000640640 TNRQ92752 1358 aa21.08■□□□□ 0.97
SCARB2-223ENST00000640640 PES1O00541 588 aaKnown RBP21.08■□□□□ 0.96
SCARB2-223ENST00000640640 RNF214Q8ND24 703 aa21.08■□□□□ 0.96
SCARB2-223ENST00000640640 CARD14Q9BXL6 1004 aa21.08■□□□□ 0.96
SCARB2-223ENST00000640640 MBIPQ9NS73 344 aa21.08■□□□□ 0.96
SCARB2-223ENST00000640640 SAFBQ15424 915 aaKnown RBP eCLIP21.08■□□□□ 0.96
SCARB2-223ENST00000640640 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.96
SCARB2-223ENST00000640640 IGHDP01880 384 aa21.07■□□□□ 0.96
SCARB2-223ENST00000640640 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
SCARB2-223ENST00000640640 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
SCARB2-223ENST00000640640 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
SCARB2-223ENST00000640640 ABCC2Q92887 1545 aa21.07■□□□□ 0.96
SCARB2-223ENST00000640640 CNNM1Q9NRU3 951 aa21.06■□□□□ 0.96
SCARB2-223ENST00000640640 SMARCA5O60264 1052 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-223ENST00000640640 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
SCARB2-223ENST00000640640 KIF1BPQ96EK5 621 aa21.06■□□□□ 0.96
SCARB2-223ENST00000640640 CIZ1Q9ULV3 898 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-223ENST00000640640 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 UHRF1BP1LA0JNW5 1464 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 FIBPO43427 364 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
SCARB2-223ENST00000640640 CWC27Q6UX04 472 aaKnown RBP21.05■□□□□ 0.96
SCARB2-223ENST00000640640 VPS53Q5VIR6 699 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 NUTM1Q86Y26 1132 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 MX1P20591 662 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 MPRIPQ6WCQ1 1025 aa21.05■□□□□ 0.96
SCARB2-223ENST00000640640 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
SCARB2-223ENST00000640640 MCM4P33991 863 aa21.04■□□□□ 0.96
SCARB2-223ENST00000640640 CCDC57Q2TAC2 916 aa21.04■□□□□ 0.96
SCARB2-223ENST00000640640 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms