RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 VAMP4O75379 141 aa20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 NME9Q86XW9 330 aa20.73■□□□□ 0.91
HNRNPU-228ENST00000640306 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
HNRNPU-228ENST00000640306 CD2BP2O95400 341 aaKnown RBP20.72■□□□□ 0.91
HNRNPU-228ENST00000640306 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
HNRNPU-228ENST00000640306 HSP90AA1P07900 732 aaKnown RBP20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 MBIPQ9NS73 344 aa20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 MRPL50Q8N5N7 158 aaKnown RBP20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 PNPLA6Q8IY17 1366 aa20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 ZNF692Q9BU19 519 aaPredicted RBP20.71■□□□□ 0.91
HNRNPU-228ENST00000640306 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
HNRNPU-228ENST00000640306 SIRT2Q8IXJ6 389 aa20.7■□□□□ 0.9
HNRNPU-228ENST00000640306 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
HNRNPU-228ENST00000640306 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
HNRNPU-228ENST00000640306 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
HNRNPU-228ENST00000640306 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
HNRNPU-228ENST00000640306 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
HNRNPU-228ENST00000640306 TBC1D9Q6ZT07 1266 aa20.68■□□□□ 0.9
HNRNPU-228ENST00000640306 TNPO1Q92973 898 aaKnown RBP20.67■□□□□ 0.9
HNRNPU-228ENST00000640306 APBB1O00213 710 aa20.67■□□□□ 0.9
HNRNPU-228ENST00000640306 BMP2KLQ5H9B9 411 aa20.67■□□□□ 0.9
HNRNPU-228ENST00000640306 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
HNRNPU-228ENST00000640306 ZFYVE9O95405 1425 aa20.66■□□□□ 0.9
HNRNPU-228ENST00000640306 FSD2A1L4K1 749 aa20.66■□□□□ 0.9
HNRNPU-228ENST00000640306 KIF2CQ99661 725 aa20.66■□□□□ 0.9
HNRNPU-228ENST00000640306 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
HNRNPU-228ENST00000640306 GNAI1P63096 354 aa20.65■□□□□ 0.9
HNRNPU-228ENST00000640306 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.89
HNRNPU-228ENST00000640306 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
HNRNPU-228ENST00000640306 PRKCSHP14314 528 aaPredicted RBP20.63■□□□□ 0.89
HNRNPU-228ENST00000640306 IL13P35225 146 aa20.63■□□□□ 0.89
HNRNPU-228ENST00000640306 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
HNRNPU-228ENST00000640306 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
HNRNPU-228ENST00000640306 MED14O60244 1454 aa20.63■□□□□ 0.89
HNRNPU-228ENST00000640306 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
HNRNPU-228ENST00000640306 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
HNRNPU-228ENST00000640306 DDX11L8A8MPP1 907 aa20.62■□□□□ 0.89
HNRNPU-228ENST00000640306 NUTM2FA1L443 756 aa20.61■□□□□ 0.89
HNRNPU-228ENST00000640306 SOX12O15370 315 aa20.61■□□□□ 0.89
HNRNPU-228ENST00000640306 IFT57Q9NWB7 429 aa20.61■□□□□ 0.89
HNRNPU-228ENST00000640306 SNX21Q969T3 373 aa20.61■□□□□ 0.89
HNRNPU-228ENST00000640306 DDIT3P35638 169 aa20.6■□□□□ 0.89
HNRNPU-228ENST00000640306 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
HNRNPU-228ENST00000640306 GSPT1P15170 499 aaKnown RBP20.59■□□□□ 0.89
HNRNPU-228ENST00000640306 CALD1Q05682 793 aaKnown RBP20.59■□□□□ 0.89
HNRNPU-228ENST00000640306 GRPEL1Q9HAV7 217 aa20.59■□□□□ 0.89
HNRNPU-228ENST00000640306 TNRQ92752 1358 aa20.59■□□□□ 0.89
HNRNPU-228ENST00000640306 GAS2L2Q8NHY3 880 aa20.58■□□□□ 0.89
HNRNPU-228ENST00000640306 OTUD7AQ8TE49 926 aaPredicted RBP20.58■□□□□ 0.89
HNRNPU-228ENST00000640306 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
HNRNPU-228ENST00000640306 ABCC4O15439 1325 aa20.58■□□□□ 0.89
HNRNPU-228ENST00000640306 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
HNRNPU-228ENST00000640306 SSFA2P28290 1259 aa20.58■□□□□ 0.88
HNRNPU-228ENST00000640306 COG3Q96JB2 828 aa20.58■□□□□ 0.88
HNRNPU-228ENST00000640306 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.88
HNRNPU-228ENST00000640306 ZNF853P0CG23 659 aa20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 GAS2L3Q86XJ1 694 aa20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 ARHGAP45Q92619 1136 aa20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 CFAP44Q96MT7 982 aa20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 K7ELQ4 463 aaPredicted RBP20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 BRPF1P55201 1214 aaPredicted RBP20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
HNRNPU-228ENST00000640306 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 MRE11P49959 708 aa20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 PTCH1Q13635 1447 aa20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 WASLO00401 505 aaPredicted RBP20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 RAB3GAP1Q15042 981 aa20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 MCM10Q7L590 875 aa20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 GBP4Q96PP9 640 aa20.56■□□□□ 0.88
HNRNPU-228ENST00000640306 KIF20BQ96Q89 1820 aa20.55■□□□□ 0.88
HNRNPU-228ENST00000640306 CDC45O75419 566 aa20.55■□□□□ 0.88
HNRNPU-228ENST00000640306 PLEKHM2Q8IWE5 1019 aa20.54■□□□□ 0.88
HNRNPU-228ENST00000640306 API5Q9BZZ5 524 aaKnown RBP20.54■□□□□ 0.88
HNRNPU-228ENST00000640306 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
HNRNPU-228ENST00000640306 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
HNRNPU-228ENST00000640306 MIS18AQ9NYP9 233 aa20.53■□□□□ 0.88
HNRNPU-228ENST00000640306 NAP1L5Q96NT1 182 aaPredicted RBP20.52■□□□□ 0.88
HNRNPU-228ENST00000640306 PIK3R4Q99570 1358 aa20.52■□□□□ 0.87
HNRNPU-228ENST00000640306 METP08581 1390 aa20.5■□□□□ 0.87
HNRNPU-228ENST00000640306 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
HNRNPU-228ENST00000640306 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
HNRNPU-228ENST00000640306 CDC42BPGQ6DT37 1551 aa20.49■□□□□ 0.87
HNRNPU-228ENST00000640306 ATP7BP35670 1465 aa20.49■□□□□ 0.87
HNRNPU-228ENST00000640306 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 MEIS3Q99687 375 aa20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 CPS1P31327 1500 aa20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 TTC22Q5TAA0 569 aa20.48■□□□□ 0.87
HNRNPU-228ENST00000640306 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
HNRNPU-228ENST00000640306 SLC4A10Q6U841 1118 aa20.47■□□□□ 0.87
HNRNPU-228ENST00000640306 NCLP19338 710 aaKnown RBP20.47■□□□□ 0.87
HNRNPU-228ENST00000640306 PKP1Q13835 747 aa20.47■□□□□ 0.87
HNRNPU-228ENST00000640306 ERBB4Q15303 1308 aa20.46■□□□□ 0.87
HNRNPU-228ENST00000640306 LTKP29376 864 aa20.46■□□□□ 0.87
HNRNPU-228ENST00000640306 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
HNRNPU-228ENST00000640306 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms