RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 NBR1Q14596 966 aa17.06■□□□□ 0.32
SPIN3-235ENST00000640104 USP6P35125 1406 aa17.05■□□□□ 0.32
SPIN3-235ENST00000640104 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
SPIN3-235ENST00000640104 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
SPIN3-235ENST00000640104 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
SPIN3-235ENST00000640104 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
SPIN3-235ENST00000640104 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
SPIN3-235ENST00000640104 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
SPIN3-235ENST00000640104 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
SPIN3-235ENST00000640104 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
SPIN3-235ENST00000640104 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
SPIN3-235ENST00000640104 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
SPIN3-235ENST00000640104 DDX19BQ9UMR2 479 aa17.02■□□□□ 0.32
SPIN3-235ENST00000640104 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.31
SPIN3-235ENST00000640104 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
SPIN3-235ENST00000640104 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
SPIN3-235ENST00000640104 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
SPIN3-235ENST00000640104 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
SPIN3-235ENST00000640104 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
SPIN3-235ENST00000640104 GNAI1P63096 354 aa17.01■□□□□ 0.31
SPIN3-235ENST00000640104 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
SPIN3-235ENST00000640104 SOX12O15370 315 aa17■□□□□ 0.31
SPIN3-235ENST00000640104 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
SPIN3-235ENST00000640104 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
SPIN3-235ENST00000640104 FAM83GA6ND36 823 aa17■□□□□ 0.31
SPIN3-235ENST00000640104 MBIPQ9NS73 344 aa17■□□□□ 0.31
SPIN3-235ENST00000640104 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
SPIN3-235ENST00000640104 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
SPIN3-235ENST00000640104 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
SPIN3-235ENST00000640104 DIP2AQ14689 1571 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 VAMP4O75379 141 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
SPIN3-235ENST00000640104 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
SPIN3-235ENST00000640104 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
SPIN3-235ENST00000640104 VIRMAQ69YN4 1812 aaKnown RBP16.97■□□□□ 0.31
SPIN3-235ENST00000640104 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
SPIN3-235ENST00000640104 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
SPIN3-235ENST00000640104 PEAK1Q9H792 1746 aa16.97■□□□□ 0.31
SPIN3-235ENST00000640104 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
SPIN3-235ENST00000640104 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-235ENST00000640104 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
SPIN3-235ENST00000640104 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
SPIN3-235ENST00000640104 HDAC1Q13547 482 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-235ENST00000640104 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
SPIN3-235ENST00000640104 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
SPIN3-235ENST00000640104 KCNA6P17658 529 aa16.94■□□□□ 0.3
SPIN3-235ENST00000640104 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
SPIN3-235ENST00000640104 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-235ENST00000640104 RGPD8O14715 1765 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-235ENST00000640104 SEC24BO95487 1268 aa16.94■□□□□ 0.3
SPIN3-235ENST00000640104 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
SPIN3-235ENST00000640104 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
SPIN3-235ENST00000640104 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
SPIN3-235ENST00000640104 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
SPIN3-235ENST00000640104 USP19O94966 1318 aa16.92■□□□□ 0.3
SPIN3-235ENST00000640104 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
SPIN3-235ENST00000640104 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
SPIN3-235ENST00000640104 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
SPIN3-235ENST00000640104 MCM10Q7L590 875 aa16.9■□□□□ 0.3
SPIN3-235ENST00000640104 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
SPIN3-235ENST00000640104 PIK3C2AO00443 1686 aa16.89■□□□□ 0.29
SPIN3-235ENST00000640104 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
SPIN3-235ENST00000640104 FLT4P35916 1363 aa16.89■□□□□ 0.29
SPIN3-235ENST00000640104 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
SPIN3-235ENST00000640104 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
SPIN3-235ENST00000640104 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
SPIN3-235ENST00000640104 AMPHP49418 695 aa16.88■□□□□ 0.29
SPIN3-235ENST00000640104 RIMS1Q86UR5 1692 aaKnown RBP16.87■□□□□ 0.29
SPIN3-235ENST00000640104 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
SPIN3-235ENST00000640104 ABCC4O15439 1325 aa16.87■□□□□ 0.29
SPIN3-235ENST00000640104 NLRP6P59044 892 aa16.87■□□□□ 0.29
SPIN3-235ENST00000640104 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
SPIN3-235ENST00000640104 KRT24Q2M2I5 525 aa16.87■□□□□ 0.29
SPIN3-235ENST00000640104 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
SPIN3-235ENST00000640104 C1orf115Q9H7X2 142 aa16.86■□□□□ 0.29
SPIN3-235ENST00000640104 CHL1O00533 1208 aa16.85■□□□□ 0.29
SPIN3-235ENST00000640104 FOXO3O43524 673 aa16.84■□□□□ 0.29
SPIN3-235ENST00000640104 API5Q9BZZ5 524 aaKnown RBP16.84■□□□□ 0.29
SPIN3-235ENST00000640104 CHMP4BQ9H444 224 aaKnown RBP16.84■□□□□ 0.29
SPIN3-235ENST00000640104 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
SPIN3-235ENST00000640104 EYA1Q99502 592 aa16.84■□□□□ 0.29
SPIN3-235ENST00000640104 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
SPIN3-235ENST00000640104 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.29
SPIN3-235ENST00000640104 NUCB1Q02818 461 aa16.83■□□□□ 0.28
SPIN3-235ENST00000640104 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
SPIN3-235ENST00000640104 DEKP35659 375 aaKnown RBP16.83■□□□□ 0.28
SPIN3-235ENST00000640104 KDRP35968 1356 aa16.82■□□□□ 0.28
SPIN3-235ENST00000640104 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
SPIN3-235ENST00000640104 CRB1P82279 1406 aa16.82■□□□□ 0.28
SPIN3-235ENST00000640104 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
SPIN3-235ENST00000640104 LNPKQ9C0E8 428 aa16.82■□□□□ 0.28
SPIN3-235ENST00000640104 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
SPIN3-235ENST00000640104 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
SPIN3-235ENST00000640104 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
SPIN3-235ENST00000640104 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
SPIN3-235ENST00000640104 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms