RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TMEM94Q12767 1356 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 SLC12A5Q9H2X9 1139 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 PANK3Q9H999 370 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 NCOA3Q9Y6Q9 1424 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 PRR36Q9H6K5 1346 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 MFSD10Q14728 455 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 NUDT16Q96DE0 195 aaKnown RBP10.86□□□□□ -0.67
SCARB2-220ENST00000640076 LARP6Q9BRS8 491 aaKnown RBP10.86□□□□□ -0.67
SCARB2-220ENST00000640076 CHMP4AQ9BY43 222 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 FMN2Q9NZ56 1722 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 FBXW7Q969H0 707 aa10.85□□□□□ -0.67
SCARB2-220ENST00000640076 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
SCARB2-220ENST00000640076 LRRC7Q96NW7 1537 aa10.85□□□□□ -0.67
SCARB2-220ENST00000640076 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
SCARB2-220ENST00000640076 PER1O15534 1290 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-220ENST00000640076 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
SCARB2-220ENST00000640076 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
SCARB2-220ENST00000640076 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
SCARB2-220ENST00000640076 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
SCARB2-220ENST00000640076 PPIP5K1Q6PFW1 1433 aa10.84□□□□□ -0.67
SCARB2-220ENST00000640076 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
SCARB2-220ENST00000640076 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 RGPD8O14715 1765 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-220ENST00000640076 CD163L1Q9NR16 1453 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 CARD14Q9BXL6 1004 aa10.83□□□□□ -0.68
SCARB2-220ENST00000640076 DCCP43146 1447 aa10.82□□□□□ -0.68
SCARB2-220ENST00000640076 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
SCARB2-220ENST00000640076 AMHR2Q16671 573 aa10.82□□□□□ -0.68
SCARB2-220ENST00000640076 A0A1W2PP64 1363 aa10.82□□□□□ -0.68
SCARB2-220ENST00000640076 PDE4AP27815 886 aa10.81□□□□□ -0.68
SCARB2-220ENST00000640076 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-220ENST00000640076 TERF2IPQ9NYB0 399 aa10.81□□□□□ -0.68
SCARB2-220ENST00000640076 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
SCARB2-220ENST00000640076 KNSTRNQ9Y448 316 aa10.81□□□□□ -0.68
SCARB2-220ENST00000640076 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
SCARB2-220ENST00000640076 NSD3Q9BZ95 1437 aa10.8□□□□□ -0.68
SCARB2-220ENST00000640076 GPR37O15354 613 aa10.8□□□□□ -0.68
SCARB2-220ENST00000640076 ANP32CO43423 234 aa10.8□□□□□ -0.68
SCARB2-220ENST00000640076 MSH6P52701 1360 aa10.8□□□□□ -0.68
SCARB2-220ENST00000640076 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-220ENST00000640076 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-220ENST00000640076 AKAP12Q02952 1782 aa10.79□□□□□ -0.68
SCARB2-220ENST00000640076 ATF3P18847 181 aa10.79□□□□□ -0.68
SCARB2-220ENST00000640076 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
SCARB2-220ENST00000640076 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 NPC1L1Q9UHC9 1359 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 PRKRIP1Q9H875 184 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-220ENST00000640076 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 MST1RQ04912 1400 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 ACEP12821 1306 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
SCARB2-220ENST00000640076 POLR3AO14802 1390 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-220ENST00000640076 KTN1Q86UP2 1357 aaKnown RBP10.78□□□□□ -0.68
SCARB2-220ENST00000640076 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.68
SCARB2-220ENST00000640076 CREBZFQ9NS37 354 aa10.77□□□□□ -0.68
SCARB2-220ENST00000640076 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
SCARB2-220ENST00000640076 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
SCARB2-220ENST00000640076 POM121Q96HA1 1249 aa10.77□□□□□ -0.69
SCARB2-220ENST00000640076 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-220ENST00000640076 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
SCARB2-220ENST00000640076 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
SCARB2-220ENST00000640076 CGNL1Q0VF96 1302 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 USP6P35125 1406 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 ESCO1Q5FWF5 840 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 ORAI2Q96SN7 254 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
SCARB2-220ENST00000640076 NRKQ7Z2Y5 1582 aa10.75□□□□□ -0.69
SCARB2-220ENST00000640076 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
SCARB2-220ENST00000640076 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
SCARB2-220ENST00000640076 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 RALBP1Q15311 655 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 KIF1AQ12756 1690 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 NSD2O96028 1365 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 NLRP6P59044 892 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 USP35Q9P2H5 1018 aa10.74□□□□□ -0.69
SCARB2-220ENST00000640076 KIF20BQ96Q89 1820 aa10.73□□□□□ -0.69
SCARB2-220ENST00000640076 IRF6O14896 467 aa10.73□□□□□ -0.69
SCARB2-220ENST00000640076 FYB1O15117 783 aa10.73□□□□□ -0.69
SCARB2-220ENST00000640076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
SCARB2-220ENST00000640076 PDE4CQ08493 712 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 SLAIN2Q9P270 581 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 UBE2Q2Q8WVN8 375 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
SCARB2-220ENST00000640076 FOXO3O43524 673 aa10.71□□□□□ -0.69
SCARB2-220ENST00000640076 GGNBP2Q9H3C7 697 aa10.71□□□□□ -0.69
SCARB2-220ENST00000640076 MYBBP1AQ9BQG0 1328 aaKnown RBP10.71□□□□□ -0.7
SCARB2-220ENST00000640076 BRD4O60885 1362 aaPredicted RBP10.71□□□□□ -0.7
SCARB2-220ENST00000640076 PSME1Q06323 249 aa10.7□□□□□ -0.7
SCARB2-220ENST00000640076 BRINP3Q76B58 766 aa10.7□□□□□ -0.7
SCARB2-220ENST00000640076 NME9Q86XW9 330 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms