RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
TRIM3-215ENST00000639856 CENPQQ7L2Z9 268 aaPredicted RBP19.52■□□□□ 0.72
TRIM3-215ENST00000639856 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
TRIM3-215ENST00000639856 ORAI2Q96SN7 254 aa19.52■□□□□ 0.72
TRIM3-215ENST00000639856 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
TRIM3-215ENST00000639856 PNNQ9H307 717 aaKnown RBP19.52■□□□□ 0.72
TRIM3-215ENST00000639856 USP54Q70EL1 1684 aa19.52■□□□□ 0.71
TRIM3-215ENST00000639856 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
TRIM3-215ENST00000639856 RIPK4P57078 832 aa19.51■□□□□ 0.71
TRIM3-215ENST00000639856 TMEM94Q12767 1356 aa19.5■□□□□ 0.71
TRIM3-215ENST00000639856 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
TRIM3-215ENST00000639856 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
TRIM3-215ENST00000639856 XPCQ01831 940 aaPredicted RBP19.48■□□□□ 0.71
TRIM3-215ENST00000639856 AEBP1Q8IUX7 1158 aa19.48■□□□□ 0.71
TRIM3-215ENST00000639856 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
TRIM3-215ENST00000639856 PDE4AP27815 886 aa19.48■□□□□ 0.71
TRIM3-215ENST00000639856 RARSP54136 660 aaKnown RBP19.48■□□□□ 0.71
TRIM3-215ENST00000639856 PSME1Q06323 249 aa19.48■□□□□ 0.71
TRIM3-215ENST00000639856 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
TRIM3-215ENST00000639856 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
TRIM3-215ENST00000639856 FOXO3O43524 673 aa19.47■□□□□ 0.71
TRIM3-215ENST00000639856 ANP32AP39687 249 aaKnown RBP19.46■□□□□ 0.71
TRIM3-215ENST00000639856 BACH2Q9BYV9 841 aa19.46■□□□□ 0.71
TRIM3-215ENST00000639856 FLT4P35916 1363 aa19.46■□□□□ 0.71
TRIM3-215ENST00000639856 C1orf167Q5SNV9 1468 aa19.46■□□□□ 0.71
TRIM3-215ENST00000639856 NEFMP07197 916 aa19.46■□□□□ 0.71
TRIM3-215ENST00000639856 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
TRIM3-215ENST00000639856 TSR2Q969E8 191 aaKnown RBP19.46■□□□□ 0.71
TRIM3-215ENST00000639856 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
TRIM3-215ENST00000639856 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
TRIM3-215ENST00000639856 AMPHP49418 695 aa19.45■□□□□ 0.7
TRIM3-215ENST00000639856 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
TRIM3-215ENST00000639856 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
TRIM3-215ENST00000639856 SKAP1Q86WV1 359 aa19.43■□□□□ 0.7
TRIM3-215ENST00000639856 LTN1O94822 1766 aa19.42■□□□□ 0.7
TRIM3-215ENST00000639856 MST1RQ04912 1400 aa19.42■□□□□ 0.7
TRIM3-215ENST00000639856 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
TRIM3-215ENST00000639856 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
TRIM3-215ENST00000639856 KIF1AQ12756 1690 aa19.42■□□□□ 0.7
TRIM3-215ENST00000639856 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
TRIM3-215ENST00000639856 TRPM3Q9HCF6 1732 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-215ENST00000639856 CT47B1P0C2W7 299 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-215ENST00000639856 PANK1Q8TE04 598 aa19.41■□□□□ 0.7
TRIM3-215ENST00000639856 ATF3P18847 181 aa19.4■□□□□ 0.7
TRIM3-215ENST00000639856 HOXC9P31274 260 aa19.4■□□□□ 0.7
TRIM3-215ENST00000639856 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
TRIM3-215ENST00000639856 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
TRIM3-215ENST00000639856 NFAT5O94916 1531 aa19.4■□□□□ 0.7
TRIM3-215ENST00000639856 IL16Q14005 1332 aa19.4■□□□□ 0.7
TRIM3-215ENST00000639856 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.69
TRIM3-215ENST00000639856 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
TRIM3-215ENST00000639856 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
TRIM3-215ENST00000639856 DCCP43146 1447 aa19.39■□□□□ 0.69
TRIM3-215ENST00000639856 ARHGEF10O15013 1369 aa19.38■□□□□ 0.69
TRIM3-215ENST00000639856 NCOA3Q9Y6Q9 1424 aa19.38■□□□□ 0.69
TRIM3-215ENST00000639856 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
TRIM3-215ENST00000639856 AAMPQ13685 434 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 EYA1Q99502 592 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 BCL2L13Q9BXK5 485 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 KRT28Q7Z3Y7 464 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
TRIM3-215ENST00000639856 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
TRIM3-215ENST00000639856 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
TRIM3-215ENST00000639856 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
TRIM3-215ENST00000639856 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
TRIM3-215ENST00000639856 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
TRIM3-215ENST00000639856 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
TRIM3-215ENST00000639856 IGHDP01880 384 aa19.34■□□□□ 0.69
TRIM3-215ENST00000639856 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
TRIM3-215ENST00000639856 KDRP35968 1356 aa19.34■□□□□ 0.69
TRIM3-215ENST00000639856 MSH6P52701 1360 aa19.34■□□□□ 0.69
TRIM3-215ENST00000639856 RLBP1P12271 317 aa19.34■□□□□ 0.69
TRIM3-215ENST00000639856 RTL1A6NKG5 1358 aa19.33■□□□□ 0.69
TRIM3-215ENST00000639856 ZBTB7CA1YPR0 619 aa19.33■□□□□ 0.69
TRIM3-215ENST00000639856 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.69
TRIM3-215ENST00000639856 SLIT3O75094 1523 aa19.33■□□□□ 0.68
TRIM3-215ENST00000639856 TNNQ9UQP3 1299 aa19.33■□□□□ 0.68
TRIM3-215ENST00000639856 ALS2Q96Q42 1657 aa19.32■□□□□ 0.68
TRIM3-215ENST00000639856 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
TRIM3-215ENST00000639856 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
TRIM3-215ENST00000639856 KCNH5Q8NCM2 988 aa19.31■□□□□ 0.68
TRIM3-215ENST00000639856 GCP02774 474 aa19.31■□□□□ 0.68
TRIM3-215ENST00000639856 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
TRIM3-215ENST00000639856 IP6K1Q92551 441 aa19.31■□□□□ 0.68
TRIM3-215ENST00000639856 ZBTB47Q9UFB7 747 aaPredicted RBP19.31■□□□□ 0.68
TRIM3-215ENST00000639856 USP19O94966 1318 aa19.3■□□□□ 0.68
TRIM3-215ENST00000639856 PHRF1Q9P1Y6 1649 aaKnown RBP19.3■□□□□ 0.68
TRIM3-215ENST00000639856 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
TRIM3-215ENST00000639856 FAM161AQ3B820 660 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
TRIM3-215ENST00000639856 RGS3P49796 1198 aa19.28■□□□□ 0.68
TRIM3-215ENST00000639856 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
TRIM3-215ENST00000639856 MCM10Q7L590 875 aa19.28■□□□□ 0.68
TRIM3-215ENST00000639856 RGPD2P0DJD1 1756 aa19.28■□□□□ 0.68
TRIM3-215ENST00000639856 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms