RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
NECAP1-219ENST00000639811 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
NECAP1-219ENST00000639811 SOX12O15370 315 aa12.67□□□□□ -0.38
NECAP1-219ENST00000639811 HSP90AB2PQ58FF8 381 aa12.67□□□□□ -0.38
NECAP1-219ENST00000639811 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
NECAP1-219ENST00000639811 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
NECAP1-219ENST00000639811 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
NECAP1-219ENST00000639811 MAP3K19Q56UN5 1328 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 MSH5O43196 834 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
NECAP1-219ENST00000639811 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 MS4A1P11836 297 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 CLUAP1Q96AJ1 413 aa12.66□□□□□ -0.38
NECAP1-219ENST00000639811 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
NECAP1-219ENST00000639811 IGHDP01880 384 aa12.65□□□□□ -0.38
NECAP1-219ENST00000639811 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
NECAP1-219ENST00000639811 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
NECAP1-219ENST00000639811 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
NECAP1-219ENST00000639811 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
NECAP1-219ENST00000639811 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 PDE4AP27815 886 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 NLRP6P59044 892 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 NUTM2GQ5VZR2 741 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
NECAP1-219ENST00000639811 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 FLT4P35916 1363 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
NECAP1-219ENST00000639811 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
NECAP1-219ENST00000639811 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 TRIM27P14373 513 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 GNAI1P63096 354 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 DCTN1Q14203 1278 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 MVPQ14764 893 aaKnown RBP12.62□□□□□ -0.39
NECAP1-219ENST00000639811 BACH2Q9BYV9 841 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
NECAP1-219ENST00000639811 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
NECAP1-219ENST00000639811 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
NECAP1-219ENST00000639811 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
NECAP1-219ENST00000639811 AAMPQ13685 434 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 VAMP4O75379 141 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-219ENST00000639811 AMPHP49418 695 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 ABTB2Q8N961 1025 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
NECAP1-219ENST00000639811 FTSJ3Q8IY81 847 aaKnown RBP12.59□□□□□ -0.39
NECAP1-219ENST00000639811 NWD1Q149M9 1564 aa12.59□□□□□ -0.39
NECAP1-219ENST00000639811 EYA1Q99502 592 aa12.59□□□□□ -0.39
NECAP1-219ENST00000639811 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
NECAP1-219ENST00000639811 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
NECAP1-219ENST00000639811 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
NECAP1-219ENST00000639811 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
NECAP1-219ENST00000639811 KDRP35968 1356 aa12.58□□□□□ -0.4
NECAP1-219ENST00000639811 HOXC9P31274 260 aa12.57□□□□□ -0.4
NECAP1-219ENST00000639811 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-219ENST00000639811 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
NECAP1-219ENST00000639811 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-219ENST00000639811 RGS3P49796 1198 aa12.57□□□□□ -0.4
NECAP1-219ENST00000639811 MCM10Q7L590 875 aa12.57□□□□□ -0.4
NECAP1-219ENST00000639811 MRPL50Q8N5N7 158 aaKnown RBP12.57□□□□□ -0.4
NECAP1-219ENST00000639811 C14orf37Q86TY3 774 aa12.56□□□□□ -0.4
NECAP1-219ENST00000639811 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
NECAP1-219ENST00000639811 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
NECAP1-219ENST00000639811 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
NECAP1-219ENST00000639811 FOXO3O43524 673 aa12.56□□□□□ -0.4
NECAP1-219ENST00000639811 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
NECAP1-219ENST00000639811 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
NECAP1-219ENST00000639811 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
NECAP1-219ENST00000639811 ORAI2Q96SN7 254 aa12.55□□□□□ -0.4
NECAP1-219ENST00000639811 CHL1O00533 1208 aa12.54□□□□□ -0.4
NECAP1-219ENST00000639811 PSME1Q06323 249 aa12.54□□□□□ -0.4
NECAP1-219ENST00000639811 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
NECAP1-219ENST00000639811 NFAT5O94916 1531 aa12.54□□□□□ -0.4
NECAP1-219ENST00000639811 CRB1P82279 1406 aa12.54□□□□□ -0.4
NECAP1-219ENST00000639811 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
NECAP1-219ENST00000639811 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-219ENST00000639811 LTN1O94822 1766 aa12.53□□□□□ -0.4
NECAP1-219ENST00000639811 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
NECAP1-219ENST00000639811 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
NECAP1-219ENST00000639811 RWDD1Q9H446 243 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-219ENST00000639811 RTL1A6NKG5 1358 aa12.52□□□□□ -0.4
NECAP1-219ENST00000639811 ARHGAP45Q92619 1136 aa12.52□□□□□ -0.4
NECAP1-219ENST00000639811 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.4
NECAP1-219ENST00000639811 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.4
NECAP1-219ENST00000639811 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
NECAP1-219ENST00000639811 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
NECAP1-219ENST00000639811 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
NECAP1-219ENST00000639811 ANP32EQ9BTT0 268 aa12.52□□□□□ -0.41
NECAP1-219ENST00000639811 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
NECAP1-219ENST00000639811 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
NECAP1-219ENST00000639811 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
NECAP1-219ENST00000639811 IP6K1Q92551 441 aa12.5□□□□□ -0.41
NECAP1-219ENST00000639811 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms