RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
PAX6-235ENST00000638629 FOXO3O43524 673 aa13.58□□□□□ -0.24
PAX6-235ENST00000638629 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
PAX6-235ENST00000638629 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
PAX6-235ENST00000638629 DCCP43146 1447 aa13.57□□□□□ -0.24
PAX6-235ENST00000638629 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
PAX6-235ENST00000638629 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
PAX6-235ENST00000638629 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
PAX6-235ENST00000638629 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
PAX6-235ENST00000638629 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
PAX6-235ENST00000638629 MST1RQ04912 1400 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
PAX6-235ENST00000638629 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
PAX6-235ENST00000638629 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
PAX6-235ENST00000638629 E9PSI1 815 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 HMOX1P09601 288 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
PAX6-235ENST00000638629 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 MSH6P52701 1360 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
PAX6-235ENST00000638629 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
PAX6-235ENST00000638629 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
PAX6-235ENST00000638629 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
PAX6-235ENST00000638629 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
PAX6-235ENST00000638629 PLIN1O60240 522 aa13.54□□□□□ -0.24
PAX6-235ENST00000638629 AMPHP49418 695 aa13.54□□□□□ -0.24
PAX6-235ENST00000638629 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
PAX6-235ENST00000638629 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
PAX6-235ENST00000638629 KIF1AQ12756 1690 aa13.54□□□□□ -0.24
PAX6-235ENST00000638629 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
PAX6-235ENST00000638629 NEFMP07197 916 aa13.53□□□□□ -0.24
PAX6-235ENST00000638629 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
PAX6-235ENST00000638629 FLT4P35916 1363 aa13.53□□□□□ -0.24
PAX6-235ENST00000638629 RIPK4P57078 832 aa13.52□□□□□ -0.25
PAX6-235ENST00000638629 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
PAX6-235ENST00000638629 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
PAX6-235ENST00000638629 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
PAX6-235ENST00000638629 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
PAX6-235ENST00000638629 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
PAX6-235ENST00000638629 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
PAX6-235ENST00000638629 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
PAX6-235ENST00000638629 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
PAX6-235ENST00000638629 HOXC9P31274 260 aa13.49□□□□□ -0.25
PAX6-235ENST00000638629 TRPM3Q9HCF6 1732 aaPredicted RBP13.49□□□□□ -0.25
PAX6-235ENST00000638629 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
PAX6-235ENST00000638629 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
PAX6-235ENST00000638629 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
PAX6-235ENST00000638629 FAM161AQ3B820 660 aa13.48□□□□□ -0.25
PAX6-235ENST00000638629 GCP02774 474 aa13.47□□□□□ -0.25
PAX6-235ENST00000638629 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
PAX6-235ENST00000638629 NFAT5O94916 1531 aa13.47□□□□□ -0.25
PAX6-235ENST00000638629 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 ARHGEF10O15013 1369 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 IP6K1Q92551 441 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 EYA1Q99502 592 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 USP19O94966 1318 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 SLAIN2Q9P270 581 aa13.46□□□□□ -0.25
PAX6-235ENST00000638629 IL16Q14005 1332 aa13.45□□□□□ -0.26
PAX6-235ENST00000638629 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
PAX6-235ENST00000638629 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
PAX6-235ENST00000638629 SLIT3O75094 1523 aa13.45□□□□□ -0.26
PAX6-235ENST00000638629 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
PAX6-235ENST00000638629 LTN1O94822 1766 aa13.44□□□□□ -0.26
PAX6-235ENST00000638629 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
PAX6-235ENST00000638629 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
PAX6-235ENST00000638629 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
PAX6-235ENST00000638629 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
PAX6-235ENST00000638629 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
PAX6-235ENST00000638629 AAMPQ13685 434 aa13.42□□□□□ -0.26
PAX6-235ENST00000638629 KDRP35968 1356 aa13.42□□□□□ -0.26
PAX6-235ENST00000638629 PXDNQ92626 1479 aa13.42□□□□□ -0.26
PAX6-235ENST00000638629 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
PAX6-235ENST00000638629 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
PAX6-235ENST00000638629 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
PAX6-235ENST00000638629 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
PAX6-235ENST00000638629 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
PAX6-235ENST00000638629 BCAR3O75815 825 aa13.4□□□□□ -0.26
PAX6-235ENST00000638629 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
PAX6-235ENST00000638629 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
PAX6-235ENST00000638629 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
PAX6-235ENST00000638629 PHRF1Q9P1Y6 1649 aaKnown RBP13.4□□□□□ -0.26
PAX6-235ENST00000638629 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
PAX6-235ENST00000638629 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
PAX6-235ENST00000638629 EXOSC9Q06265 439 aaKnown RBP13.39□□□□□ -0.27
PAX6-235ENST00000638629 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
PAX6-235ENST00000638629 RARSP54136 660 aaKnown RBP13.38□□□□□ -0.27
PAX6-235ENST00000638629 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
PAX6-235ENST00000638629 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
PAX6-235ENST00000638629 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms