RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
SMARCA2-265ENST00000638139 KIF2CQ99661 725 aa12.59□□□□□ -0.39
SMARCA2-265ENST00000638139 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-265ENST00000638139 TNPO1Q92973 898 aaKnown RBP12.58□□□□□ -0.4
SMARCA2-265ENST00000638139 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
SMARCA2-265ENST00000638139 DLG5Q8TDM6 1919 aa12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 MRE11P49959 708 aa12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 GNAI1P63096 354 aa12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 ABCC4O15439 1325 aa12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 ATP7BP35670 1465 aa12.57□□□□□ -0.4
SMARCA2-265ENST00000638139 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
SMARCA2-265ENST00000638139 IL13P35225 146 aa12.55□□□□□ -0.4
SMARCA2-265ENST00000638139 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
SMARCA2-265ENST00000638139 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
SMARCA2-265ENST00000638139 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
SMARCA2-265ENST00000638139 GRPEL1Q9HAV7 217 aa12.55□□□□□ -0.4
SMARCA2-265ENST00000638139 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
SMARCA2-265ENST00000638139 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
SMARCA2-265ENST00000638139 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
SMARCA2-265ENST00000638139 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
SMARCA2-265ENST00000638139 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
SMARCA2-265ENST00000638139 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.4
SMARCA2-265ENST00000638139 CDC45O75419 566 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 NME9Q86XW9 330 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 CLCN1P35523 988 aa12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 API5Q9BZZ5 524 aaKnown RBP12.52□□□□□ -0.41
SMARCA2-265ENST00000638139 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 GAS2L3Q86XJ1 694 aa12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 FAM83GA6ND36 823 aa12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 SKOR2Q2VWA4 1001 aaPredicted RBP12.51□□□□□ -0.41
SMARCA2-265ENST00000638139 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
SMARCA2-265ENST00000638139 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
SMARCA2-265ENST00000638139 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
SMARCA2-265ENST00000638139 PLEKHM2Q8IWE5 1019 aa12.5□□□□□ -0.41
SMARCA2-265ENST00000638139 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 PTMSP20962 102 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 SSFA2P28290 1259 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
SMARCA2-265ENST00000638139 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
SMARCA2-265ENST00000638139 CPS1P31327 1500 aa12.48□□□□□ -0.41
SMARCA2-265ENST00000638139 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
SMARCA2-265ENST00000638139 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
SMARCA2-265ENST00000638139 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 CLEC17AQ6ZS10 378 aa12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 COG3Q96JB2 828 aa12.47□□□□□ -0.41
SMARCA2-265ENST00000638139 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
SMARCA2-265ENST00000638139 ERBB4Q15303 1308 aa12.46□□□□□ -0.42
SMARCA2-265ENST00000638139 ESPNB1AK53 854 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 RABEP1Q15276 862 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 AKAP12Q02952 1782 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 NRXN3Q9Y4C0 1643 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 RGS12O14924 1447 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 C3P01024 1663 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
SMARCA2-265ENST00000638139 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
SMARCA2-265ENST00000638139 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
SMARCA2-265ENST00000638139 METP08581 1390 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
SMARCA2-265ENST00000638139 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms