RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 RIPK4P57078 832 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 TRMT2AQ8IZ69 625 aaKnown RBP8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 RGPD1P0DJD0 1748 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 TRPM3Q9HCF6 1732 aaPredicted RBP8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 IL16Q14005 1332 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 MAP3K19Q56UN5 1328 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 RTL1A6NKG5 1358 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 HMOX1P09601 288 aa8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 PHF23Q9BUL5 403 aaPredicted RBP8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 ARHGEF10O15013 1369 aa8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 MST1RQ04912 1400 aa8.18□□□□□ -1.1
CACNA1D-227ENST00000637844 XIRP1Q702N8 1843 aaKnown RBP8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 FOXO3O43524 673 aa8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 NUTM2GQ5VZR2 741 aa8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 KRT28Q7Z3Y7 464 aa8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 ORAI2Q96SN7 254 aa8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 PHRF1Q9P1Y6 1649 aaKnown RBP8.17□□□□□ -1.1
CACNA1D-227ENST00000637844 SLIT3O75094 1523 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 CT47B1P0C2W7 299 aaPredicted RBP8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 HSP90AB2PQ58FF8 381 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 SULT6B1Q6IMI4 303 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 DLG5Q8TDM6 1919 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 ALS2Q96Q42 1657 aa8.16□□□□□ -1.1
CACNA1D-227ENST00000637844 NFAT5O94916 1531 aa8.15□□□□□ -1.1
CACNA1D-227ENST00000637844 CCDC136Q96JN2 1154 aa8.15□□□□□ -1.1
CACNA1D-227ENST00000637844 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 HOXC9P31274 260 aa8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 GNAI1P63096 354 aa8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 IP6K1Q92551 441 aa8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 SPINK5Q9NQ38 1064 aaPredicted RBP8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 TRIM35Q9UPQ4 493 aa8.14□□□□□ -1.11
CACNA1D-227ENST00000637844 FANCIQ9NVI1 1328 aa8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 MS4A1P11836 297 aa8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 HAP1P54257 671 aaPredicted RBP8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 RTF1Q92541 710 aaKnown RBP8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 PHACTR3Q96KR7 559 aa8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
CACNA1D-227ENST00000637844 TNS3Q68CZ2 1445 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 KDRP35968 1356 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 USP19O94966 1318 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 IGSF1Q8N6C5 1336 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 ZNF335Q9H4Z2 1342 aaPredicted RBP8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 GCP02774 474 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 LTV1Q96GA3 475 aaPredicted RBP8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 LAS1LQ9Y4W2 734 aaKnown RBP8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 ABCC6O95255 1503 aa8.12□□□□□ -1.11
CACNA1D-227ENST00000637844 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 PLIN1O60240 522 aa8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 EXOSC9Q06265 439 aaKnown RBP8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 AEBP1Q8IUX7 1158 aa8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 EYA1Q99502 592 aa8.11□□□□□ -1.11
CACNA1D-227ENST00000637844 MED1Q15648 1581 aaPredicted RBP8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 HTATSF1O43719 755 aaKnown RBP8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 RARSP54136 660 aaKnown RBP8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 PDE3AQ14432 1141 aa8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 SLAIN2Q9P270 581 aa8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 PXDNQ92626 1479 aa8.1□□□□□ -1.11
CACNA1D-227ENST00000637844 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 KIF16BQ96L93 1317 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 BCAR3O75815 825 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 PLEKHG5O94827 1062 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 AAMPQ13685 434 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 NHSL1Q5SYE7 1610 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 CRYBG1Q9Y4K1 1723 aa8.09□□□□□ -1.11
CACNA1D-227ENST00000637844 CAMTA1Q9Y6Y1 1673 aa8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 ZKSCAN2Q63HK3 967 aa8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 BRINP3Q76B58 766 aa8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 FTSJ3Q8IY81 847 aaKnown RBP8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
CACNA1D-227ENST00000637844 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 LRRC37A3O60309 1634 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 MTHFSDQ2M296 383 aaKnown RBP8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 AMOTQ4VCS5 1084 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 PLEKHO1Q53GL0 409 aaPredicted RBP8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 LMO7Q8WWI1 1683 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
CACNA1D-227ENST00000637844 FAM83GA6ND36 823 aa8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 CSB-PGBD3P0DP91 1061 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms