RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 FCHSD2O94868 740 aa25■■□□□ 1.59
CACNA1A-243ENST00000637616 ANP32BQ92688 251 aaKnown RBP25■■□□□ 1.59
CACNA1A-243ENST00000637616 MBIPQ9NS73 344 aa25■■□□□ 1.59
CACNA1A-243ENST00000637616 CFAP74Q9C0B2 1584 aa25■■□□□ 1.59
CACNA1A-243ENST00000637616 ABCA9Q8IUA7 1624 aa25■■□□□ 1.59
CACNA1A-243ENST00000637616 PLEKHM2Q8IWE5 1019 aa24.99■■□□□ 1.59
CACNA1A-243ENST00000637616 C8orf58Q8NAV2 365 aa24.99■■□□□ 1.59
CACNA1A-243ENST00000637616 PPP1R9BQ96SB3 815 aa24.99■■□□□ 1.59
CACNA1A-243ENST00000637616 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
CACNA1A-243ENST00000637616 IDI1Q13907 227 aa24.98■■□□□ 1.59
CACNA1A-243ENST00000637616 FOXD4L5Q5VV16 416 aaPredicted RBP24.98■■□□□ 1.59
CACNA1A-243ENST00000637616 ZSCAN30Q86W11 494 aa24.98■■□□□ 1.59
CACNA1A-243ENST00000637616 FOXD4L4Q8WXT5 416 aaPredicted RBP24.98■■□□□ 1.59
CACNA1A-243ENST00000637616 RBM27Q9P2N5 1060 aaKnown RBP24.98■■□□□ 1.59
CACNA1A-243ENST00000637616 FAM83GA6ND36 823 aa24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 PTMSP20962 102 aa24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 ZGPATQ8N5A5 531 aaKnown RBP24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 RBM10P98175 930 aaKnown RBP24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 DCTN1Q14203 1278 aa24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 TWISTNBQ3B726 338 aaPredicted RBP24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 POLKQ9UBT6 870 aa24.97■■□□□ 1.59
CACNA1A-243ENST00000637616 MSNP26038 577 aaKnown RBP24.96■■□□□ 1.59
CACNA1A-243ENST00000637616 CALD1Q05682 793 aaKnown RBP24.96■■□□□ 1.59
CACNA1A-243ENST00000637616 ZSCAN23Q3MJ62 389 aa24.96■■□□□ 1.59
CACNA1A-243ENST00000637616 RBSNQ9H1K0 784 aa24.96■■□□□ 1.59
CACNA1A-243ENST00000637616 CAMSAP1Q5T5Y3 1602 aa24.96■■□□□ 1.59
CACNA1A-243ENST00000637616 MED14O60244 1454 aa24.95■■□□□ 1.59
CACNA1A-243ENST00000637616 PRPF40AO75400 957 aaKnown RBP24.95■■□□□ 1.59
CACNA1A-243ENST00000637616 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.59
CACNA1A-243ENST00000637616 ARHGEF28Q8N1W1 1705 aaKnown RBP24.95■■□□□ 1.59
CACNA1A-243ENST00000637616 SMARCA5O60264 1052 aaPredicted RBP24.95■■□□□ 1.58
CACNA1A-243ENST00000637616 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
CACNA1A-243ENST00000637616 CDK19Q9BWU1 502 aa24.95■■□□□ 1.58
CACNA1A-243ENST00000637616 EMILIN1Q9Y6C2 1016 aa24.94■■□□□ 1.58
CACNA1A-243ENST00000637616 LMTK2Q8IWU2 1503 aa24.94■■□□□ 1.58
CACNA1A-243ENST00000637616 LMBRD1Q9NUN5 540 aa24.94■■□□□ 1.58
CACNA1A-243ENST00000637616 PRIM1P49642 420 aaKnown RBP24.93■■□□□ 1.58
CACNA1A-243ENST00000637616 LRRC7Q96NW7 1537 aa24.93■■□□□ 1.58
CACNA1A-243ENST00000637616 USP26Q9BXU7 913 aa24.93■■□□□ 1.58
CACNA1A-243ENST00000637616 RABEP1Q15276 862 aa24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 ABCC4O15439 1325 aa24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 CD163L1Q9NR16 1453 aa24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 TPM2P07951 284 aa24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 BRPF1P55201 1214 aaPredicted RBP24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 ARHGAP45Q92619 1136 aa24.92■■□□□ 1.58
CACNA1A-243ENST00000637616 PNPLA6Q8IY17 1366 aa24.91■■□□□ 1.58
CACNA1A-243ENST00000637616 CLEC17AQ6ZS10 378 aa24.91■■□□□ 1.58
CACNA1A-243ENST00000637616 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
CACNA1A-243ENST00000637616 TTC22Q5TAA0 569 aa24.91■■□□□ 1.58
CACNA1A-243ENST00000637616 R3HCC1Q9Y3T6 440 aaKnown RBP24.91■■□□□ 1.58
CACNA1A-243ENST00000637616 GNAI1P63096 354 aa24.9■■□□□ 1.58
CACNA1A-243ENST00000637616 CHMP4BQ9H444 224 aaKnown RBP24.9■■□□□ 1.58
CACNA1A-243ENST00000637616 ZRANB1Q9UGI0 708 aa24.9■■□□□ 1.58
CACNA1A-243ENST00000637616 XPCQ01831 940 aaPredicted RBP24.89■■□□□ 1.58
CACNA1A-243ENST00000637616 ZNF428Q96B54 188 aa24.89■■□□□ 1.58
CACNA1A-243ENST00000637616 OFD1O75665 1012 aa24.89■■□□□ 1.57
CACNA1A-243ENST00000637616 GPT2Q8TD30 523 aa24.89■■□□□ 1.57
CACNA1A-243ENST00000637616 RAPGEF3O95398 923 aa24.88■■□□□ 1.57
CACNA1A-243ENST00000637616 NSFL1CQ9UNZ2 370 aaKnown RBP24.88■■□□□ 1.57
CACNA1A-243ENST00000637616 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
CACNA1A-243ENST00000637616 ASXL2Q76L83 1435 aa24.88■■□□□ 1.57
CACNA1A-243ENST00000637616 NUCB2P80303 420 aa24.88■■□□□ 1.57
CACNA1A-243ENST00000637616 FAM135BQ49AJ0 1406 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 SDSP20132 328 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 ZNF445P59923 1031 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 DCTPP1Q9H773 170 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 IFT57Q9NWB7 429 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 ZDHHC9Q9Y397 364 aa24.87■■□□□ 1.57
CACNA1A-243ENST00000637616 ZBTB7CA1YPR0 619 aa24.86■■□□□ 1.57
CACNA1A-243ENST00000637616 CYP2E1P05181 493 aaPredicted RBP24.86■■□□□ 1.57
CACNA1A-243ENST00000637616 ARID3AQ99856 593 aa24.86■■□□□ 1.57
CACNA1A-243ENST00000637616 WAPLQ7Z5K2 1190 aa24.85■■□□□ 1.57
CACNA1A-243ENST00000637616 NEXMIFQ5QGS0 1516 aa24.85■■□□□ 1.57
CACNA1A-243ENST00000637616 FAM13BQ9NYF5 915 aa24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 ZNF853P0CG23 659 aa24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 INTS3Q68E01 1043 aaKnown RBP24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 API5Q9BZZ5 524 aaKnown RBP24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 SYCE3A1L190 88 aa24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 RNF214Q8ND24 703 aa24.84■■□□□ 1.57
CACNA1A-243ENST00000637616 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
CACNA1A-243ENST00000637616 FRMPD1Q5SYB0 1578 aa24.83■■□□□ 1.57
CACNA1A-243ENST00000637616 RRS1Q15050 365 aaKnown RBP24.83■■□□□ 1.57
CACNA1A-243ENST00000637616 PDCL3Q9H2J4 239 aa24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 ABCC3O15438 1527 aa24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 FOXD4L6Q3SYB3 417 aaPredicted RBP24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 FOXD4L3Q6VB84 417 aaPredicted RBP24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 NOL8Q76FK4 1167 aaKnown RBP24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 TMEM63CQ9P1W3 806 aa24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 NME9Q86XW9 330 aa24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 CFAP44Q96MT7 982 aa24.82■■□□□ 1.56
CACNA1A-243ENST00000637616 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
CACNA1A-243ENST00000637616 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
CACNA1A-243ENST00000637616 IL13P35225 146 aa24.8■■□□□ 1.56
CACNA1A-243ENST00000637616 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.8■■□□□ 1.56
CACNA1A-243ENST00000637616 ST18O60284 1047 aa24.8■■□□□ 1.56
CACNA1A-243ENST00000637616 TSHZ3Q63HK5 1081 aa24.8■■□□□ 1.56
CACNA1A-243ENST00000637616 PTPRMP28827 1452 aa24.8■■□□□ 1.56
CACNA1A-243ENST00000637616 NOL7Q9UMY1 257 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms