RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
CHRNA7-227ENST00000637350 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
CHRNA7-227ENST00000637350 PIK3C2AO00443 1686 aa21.92■■□□□ 1.1
CHRNA7-227ENST00000637350 ESCO1Q5FWF5 840 aa21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 TRIM35Q9UPQ4 493 aa21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 FCHSD2O94868 740 aa21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 IGHDP01880 384 aa21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 RLBP1P12271 317 aa21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 TMPOP42166 694 aaKnown RBP21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
CHRNA7-227ENST00000637350 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
CHRNA7-227ENST00000637350 IL13P35225 146 aa21.9■■□□□ 1.1
CHRNA7-227ENST00000637350 STRCP1A6NGW2 1772 aa21.89■■□□□ 1.1
CHRNA7-227ENST00000637350 MAPK8IP3Q9UPT6 1336 aa21.89■■□□□ 1.09
CHRNA7-227ENST00000637350 NLRP6P59044 892 aa21.88■■□□□ 1.09
CHRNA7-227ENST00000637350 CLUAP1Q96AJ1 413 aa21.88■■□□□ 1.09
CHRNA7-227ENST00000637350 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
CHRNA7-227ENST00000637350 NCOA3Q9Y6Q9 1424 aa21.87■■□□□ 1.09
CHRNA7-227ENST00000637350 DLG5Q8TDM6 1919 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 RGS3P49796 1198 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 STRCQ7RTU9 1775 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 USP54Q70EL1 1684 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
CHRNA7-227ENST00000637350 PSME1Q06323 249 aa21.85■■□□□ 1.09
CHRNA7-227ENST00000637350 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
CHRNA7-227ENST00000637350 SOX12O15370 315 aa21.84■■□□□ 1.09
CHRNA7-227ENST00000637350 ORAI2Q96SN7 254 aa21.84■■□□□ 1.09
CHRNA7-227ENST00000637350 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
CHRNA7-227ENST00000637350 PEAK1Q9H792 1746 aa21.83■■□□□ 1.09
CHRNA7-227ENST00000637350 NEFMP07197 916 aa21.83■■□□□ 1.09
CHRNA7-227ENST00000637350 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
CHRNA7-227ENST00000637350 MARF1Q9Y4F3 1742 aaKnown RBP21.83■■□□□ 1.09
CHRNA7-227ENST00000637350 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 HMOX1P09601 288 aa21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 DCCP43146 1447 aa21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 EXOSC9Q06265 439 aaKnown RBP21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 NUTM2GQ5VZR2 741 aa21.82■■□□□ 1.08
CHRNA7-227ENST00000637350 ATF3P18847 181 aa21.81■■□□□ 1.08
CHRNA7-227ENST00000637350 RIPK4P57078 832 aa21.81■■□□□ 1.08
CHRNA7-227ENST00000637350 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
CHRNA7-227ENST00000637350 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
CHRNA7-227ENST00000637350 FOXO3O43524 673 aa21.8■■□□□ 1.08
CHRNA7-227ENST00000637350 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
CHRNA7-227ENST00000637350 FLT4P35916 1363 aa21.8■■□□□ 1.08
CHRNA7-227ENST00000637350 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
CHRNA7-227ENST00000637350 PCDHB15Q9Y5E8 787 aa21.79■■□□□ 1.08
CHRNA7-227ENST00000637350 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
CHRNA7-227ENST00000637350 MST1RQ04912 1400 aa21.77■■□□□ 1.08
CHRNA7-227ENST00000637350 IL16Q14005 1332 aa21.77■■□□□ 1.08
CHRNA7-227ENST00000637350 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
CHRNA7-227ENST00000637350 AMPHP49418 695 aa21.76■■□□□ 1.07
CHRNA7-227ENST00000637350 NBR1Q14596 966 aa21.76■■□□□ 1.07
CHRNA7-227ENST00000637350 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
CHRNA7-227ENST00000637350 PHACTR3Q96KR7 559 aa21.76■■□□□ 1.07
CHRNA7-227ENST00000637350 SSH1Q8WYL5 1049 aa21.75■■□□□ 1.07
CHRNA7-227ENST00000637350 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
CHRNA7-227ENST00000637350 MSH6P52701 1360 aa21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 ZKSCAN2Q63HK3 967 aa21.74■■□□□ 1.07
CHRNA7-227ENST00000637350 XPCQ01831 940 aaPredicted RBP21.73■■□□□ 1.07
CHRNA7-227ENST00000637350 SULT6B1Q6IMI4 303 aa21.72■■□□□ 1.07
CHRNA7-227ENST00000637350 XIRP1Q702N8 1843 aaKnown RBP21.72■■□□□ 1.07
CHRNA7-227ENST00000637350 TRIM27P14373 513 aa21.72■■□□□ 1.07
CHRNA7-227ENST00000637350 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
CHRNA7-227ENST00000637350 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
CHRNA7-227ENST00000637350 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
CHRNA7-227ENST00000637350 HOXC9P31274 260 aa21.71■■□□□ 1.07
CHRNA7-227ENST00000637350 DZIP1LQ8IYY4 767 aaKnown RBP21.71■■□□□ 1.07
CHRNA7-227ENST00000637350 THUMPD2Q9BTF0 503 aaKnown RBP21.71■■□□□ 1.07
CHRNA7-227ENST00000637350 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
CHRNA7-227ENST00000637350 ARHGEF10O15013 1369 aa21.7■■□□□ 1.06
CHRNA7-227ENST00000637350 FTSJ3Q8IY81 847 aaKnown RBP21.7■■□□□ 1.06
CHRNA7-227ENST00000637350 NFAT5O94916 1531 aa21.69■■□□□ 1.06
CHRNA7-227ENST00000637350 ZNF335Q9H4Z2 1342 aaPredicted RBP21.69■■□□□ 1.06
CHRNA7-227ENST00000637350 LTN1O94822 1766 aa21.69■■□□□ 1.06
CHRNA7-227ENST00000637350 RTL1A6NKG5 1358 aa21.69■■□□□ 1.06
CHRNA7-227ENST00000637350 AAMPQ13685 434 aa21.68■■□□□ 1.06
CHRNA7-227ENST00000637350 NOB1Q9ULX3 412 aaKnown RBP21.67■■□□□ 1.06
CHRNA7-227ENST00000637350 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
CHRNA7-227ENST00000637350 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
CHRNA7-227ENST00000637350 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
CHRNA7-227ENST00000637350 IGSF1Q8N6C5 1336 aa21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 KDRP35968 1356 aa21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 CALD1Q05682 793 aaKnown RBP21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 EYA1Q99502 592 aa21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 LAS1LQ9Y4W2 734 aaKnown RBP21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 SLIT3O75094 1523 aa21.65■■□□□ 1.06
CHRNA7-227ENST00000637350 IP6K1Q92551 441 aa21.64■■□□□ 1.06
CHRNA7-227ENST00000637350 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.06
CHRNA7-227ENST00000637350 GCP02774 474 aa21.64■■□□□ 1.05
CHRNA7-227ENST00000637350 NPHP3Q7Z494 1330 aa21.64■■□□□ 1.05
CHRNA7-227ENST00000637350 DDRGK1Q96HY6 314 aa21.63■■□□□ 1.05
CHRNA7-227ENST00000637350 USP19O94966 1318 aa21.63■■□□□ 1.05
CHRNA7-227ENST00000637350 PHRF1Q9P1Y6 1649 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms