RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 ATF7IPQ6VMQ6 1270 aa19.16■□□□□ 0.66
CLN5-209ENST00000636405 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
CLN5-209ENST00000636405 PLEKHG3A1L390 1219 aa19.16■□□□□ 0.66
CLN5-209ENST00000636405 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
CLN5-209ENST00000636405 SULT6B1Q6IMI4 303 aa19.16■□□□□ 0.66
CLN5-209ENST00000636405 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
CLN5-209ENST00000636405 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
CLN5-209ENST00000636405 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
CLN5-209ENST00000636405 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
CLN5-209ENST00000636405 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.65
CLN5-209ENST00000636405 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
CLN5-209ENST00000636405 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
CLN5-209ENST00000636405 KCNA6P17658 529 aa19.14■□□□□ 0.65
CLN5-209ENST00000636405 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
CLN5-209ENST00000636405 USP6P35125 1406 aa19.12■□□□□ 0.65
CLN5-209ENST00000636405 SEC24BO95487 1268 aa19.12■□□□□ 0.65
CLN5-209ENST00000636405 AKAP12Q02952 1782 aa19.11■□□□□ 0.65
CLN5-209ENST00000636405 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
CLN5-209ENST00000636405 VAMP4O75379 141 aa19.11■□□□□ 0.65
CLN5-209ENST00000636405 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
CLN5-209ENST00000636405 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
CLN5-209ENST00000636405 ARHGAP23Q9P227 1491 aa19.1■□□□□ 0.65
CLN5-209ENST00000636405 FER1L4A9Z1Z3 1794 aa19.09■□□□□ 0.65
CLN5-209ENST00000636405 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
CLN5-209ENST00000636405 MCM10Q7L590 875 aa19.09■□□□□ 0.65
CLN5-209ENST00000636405 SLIT1O75093 1534 aa19.09■□□□□ 0.65
CLN5-209ENST00000636405 GNAI1P63096 354 aa19.08■□□□□ 0.65
CLN5-209ENST00000636405 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 ZNF853P0CG23 659 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 IFT57Q9NWB7 429 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 DDX19BQ9UMR2 479 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 MAP3K19Q56UN5 1328 aa19.08■□□□□ 0.64
CLN5-209ENST00000636405 TWISTNBQ3B726 338 aaPredicted RBP19.06■□□□□ 0.64
CLN5-209ENST00000636405 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
CLN5-209ENST00000636405 KIF16BQ96L93 1317 aa19.06■□□□□ 0.64
CLN5-209ENST00000636405 IPO8O15397 1037 aaKnown RBP19.06■□□□□ 0.64
CLN5-209ENST00000636405 FOXO3O43524 673 aa19.06■□□□□ 0.64
CLN5-209ENST00000636405 AAMPQ13685 434 aa19.06■□□□□ 0.64
CLN5-209ENST00000636405 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
CLN5-209ENST00000636405 CFAP44Q96MT7 982 aa19.06■□□□□ 0.64
CLN5-209ENST00000636405 C1orf115Q9H7X2 142 aa19.05■□□□□ 0.64
CLN5-209ENST00000636405 NLRP6P59044 892 aa19.04■□□□□ 0.64
CLN5-209ENST00000636405 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
CLN5-209ENST00000636405 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
CLN5-209ENST00000636405 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
CLN5-209ENST00000636405 SSH2Q76I76 1423 aa19.04■□□□□ 0.64
CLN5-209ENST00000636405 RGPD8O14715 1765 aaPredicted RBP19.04■□□□□ 0.64
CLN5-209ENST00000636405 TOPAZ1Q8N9V7 1692 aa19.03■□□□□ 0.64
CLN5-209ENST00000636405 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
CLN5-209ENST00000636405 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
CLN5-209ENST00000636405 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
CLN5-209ENST00000636405 PEAK1Q9H792 1746 aa19.02■□□□□ 0.64
CLN5-209ENST00000636405 AMPHP49418 695 aa19.02■□□□□ 0.64
CLN5-209ENST00000636405 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
CLN5-209ENST00000636405 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
CLN5-209ENST00000636405 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
CLN5-209ENST00000636405 USP31Q70CQ4 1352 aa19.01■□□□□ 0.63
CLN5-209ENST00000636405 USP19O94966 1318 aa19.01■□□□□ 0.63
CLN5-209ENST00000636405 DLG5Q8TDM6 1919 aa19.01■□□□□ 0.63
CLN5-209ENST00000636405 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
CLN5-209ENST00000636405 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
CLN5-209ENST00000636405 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
CLN5-209ENST00000636405 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
CLN5-209ENST00000636405 EYA1Q99502 592 aa18.99■□□□□ 0.63
CLN5-209ENST00000636405 HDAC1Q13547 482 aaPredicted RBP18.98■□□□□ 0.63
CLN5-209ENST00000636405 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
CLN5-209ENST00000636405 ZBTB7BO15156 539 aaPredicted RBP18.98■□□□□ 0.63
CLN5-209ENST00000636405 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
CLN5-209ENST00000636405 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
CLN5-209ENST00000636405 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
CLN5-209ENST00000636405 BRPF1P55201 1214 aaPredicted RBP18.96■□□□□ 0.63
CLN5-209ENST00000636405 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
CLN5-209ENST00000636405 LNPKQ9C0E8 428 aa18.95■□□□□ 0.62
CLN5-209ENST00000636405 CEP170BQ9Y4F5 1589 aaPredicted RBP18.95■□□□□ 0.62
CLN5-209ENST00000636405 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
CLN5-209ENST00000636405 CHL1O00533 1208 aa18.94■□□□□ 0.62
CLN5-209ENST00000636405 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
CLN5-209ENST00000636405 FLT4P35916 1363 aa18.94■□□□□ 0.62
CLN5-209ENST00000636405 RIMS1Q86UR5 1692 aaKnown RBP18.94■□□□□ 0.62
CLN5-209ENST00000636405 USHBP1Q8N6Y0 703 aa18.94■□□□□ 0.62
CLN5-209ENST00000636405 SBNO1A3KN83 1393 aa18.94■□□□□ 0.62
CLN5-209ENST00000636405 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
CLN5-209ENST00000636405 XRN1Q8IZH2 1706 aaKnown RBP18.92■□□□□ 0.62
CLN5-209ENST00000636405 HOXC9P31274 260 aa18.92■□□□□ 0.62
CLN5-209ENST00000636405 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
CLN5-209ENST00000636405 SIRT2Q8IXJ6 389 aa18.92■□□□□ 0.62
CLN5-209ENST00000636405 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
CLN5-209ENST00000636405 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
CLN5-209ENST00000636405 ABCC4O15439 1325 aa18.91■□□□□ 0.62
CLN5-209ENST00000636405 ESCO1Q5FWF5 840 aa18.91■□□□□ 0.62
CLN5-209ENST00000636405 PIK3C2AO00443 1686 aa18.91■□□□□ 0.62
CLN5-209ENST00000636405 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
CLN5-209ENST00000636405 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
CLN5-209ENST00000636405 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
CLN5-209ENST00000636405 ANKRD45Q5TZF3 282 aa18.9■□□□□ 0.62
CLN5-209ENST00000636405 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
CLN5-209ENST00000636405 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
CLN5-209ENST00000636405 TSPYL4Q9UJ04 414 aa18.89■□□□□ 0.61
CLN5-209ENST00000636405 CRB1P82279 1406 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms