RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 NEFMP07197 916 aa18.57■□□□□ 0.56
LIMS4-204ENST00000632897 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
LIMS4-204ENST00000632897 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.57■□□□□ 0.56
LIMS4-204ENST00000632897 PHF8Q9UPP1 1060 aa18.56■□□□□ 0.56
LIMS4-204ENST00000632897 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
LIMS4-204ENST00000632897 IL16Q14005 1332 aa18.55■□□□□ 0.56
LIMS4-204ENST00000632897 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
LIMS4-204ENST00000632897 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
LIMS4-204ENST00000632897 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.56
LIMS4-204ENST00000632897 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
LIMS4-204ENST00000632897 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.56
LIMS4-204ENST00000632897 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
LIMS4-204ENST00000632897 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.55
LIMS4-204ENST00000632897 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.55
LIMS4-204ENST00000632897 MARF1Q9Y4F3 1742 aaKnown RBP18.51■□□□□ 0.55
LIMS4-204ENST00000632897 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
LIMS4-204ENST00000632897 MST1RQ04912 1400 aa18.51■□□□□ 0.55
LIMS4-204ENST00000632897 RIPK4P57078 832 aa18.51■□□□□ 0.55
LIMS4-204ENST00000632897 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
LIMS4-204ENST00000632897 FLT4P35916 1363 aa18.5■□□□□ 0.55
LIMS4-204ENST00000632897 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
LIMS4-204ENST00000632897 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
LIMS4-204ENST00000632897 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
LIMS4-204ENST00000632897 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
LIMS4-204ENST00000632897 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
LIMS4-204ENST00000632897 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
LIMS4-204ENST00000632897 KIF1AQ12756 1690 aa18.48■□□□□ 0.55
LIMS4-204ENST00000632897 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
LIMS4-204ENST00000632897 PLIN1O60240 522 aa18.48■□□□□ 0.55
LIMS4-204ENST00000632897 NLRP6P59044 892 aa18.48■□□□□ 0.55
LIMS4-204ENST00000632897 HMOX1P09601 288 aa18.47■□□□□ 0.55
LIMS4-204ENST00000632897 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
LIMS4-204ENST00000632897 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
LIMS4-204ENST00000632897 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
LIMS4-204ENST00000632897 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
LIMS4-204ENST00000632897 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
LIMS4-204ENST00000632897 POTEAQ6S8J7 498 aa18.46■□□□□ 0.54
LIMS4-204ENST00000632897 ABTB2Q8N961 1025 aa18.46■□□□□ 0.54
LIMS4-204ENST00000632897 LRRC59Q96AG4 307 aaKnown RBP18.46■□□□□ 0.54
LIMS4-204ENST00000632897 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
LIMS4-204ENST00000632897 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
LIMS4-204ENST00000632897 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
LIMS4-204ENST00000632897 PSME1Q06323 249 aa18.44■□□□□ 0.54
LIMS4-204ENST00000632897 HSP90AB2PQ58FF8 381 aa18.44■□□□□ 0.54
LIMS4-204ENST00000632897 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
LIMS4-204ENST00000632897 LRP6O75581 1613 aa18.43■□□□□ 0.54
LIMS4-204ENST00000632897 C1orf167Q5SNV9 1468 aa18.43■□□□□ 0.54
LIMS4-204ENST00000632897 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
LIMS4-204ENST00000632897 AMPHP49418 695 aa18.43■□□□□ 0.54
LIMS4-204ENST00000632897 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
LIMS4-204ENST00000632897 SOX12O15370 315 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 BCAR3O75815 825 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 NFAT5O94916 1531 aa18.41■□□□□ 0.54
LIMS4-204ENST00000632897 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
LIMS4-204ENST00000632897 KDRP35968 1356 aa18.4■□□□□ 0.54
LIMS4-204ENST00000632897 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.54
LIMS4-204ENST00000632897 TRPM3Q9HCF6 1732 aaPredicted RBP18.39■□□□□ 0.54
LIMS4-204ENST00000632897 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.54
LIMS4-204ENST00000632897 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 SLIT3O75094 1523 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 NUTM2BA6NNL0 878 aaPredicted RBP18.38■□□□□ 0.53
LIMS4-204ENST00000632897 NUTM2EB1AL46 878 aaPredicted RBP18.38■□□□□ 0.53
LIMS4-204ENST00000632897 HOXC9P31274 260 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 NUTM2GQ5VZR2 741 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 NUTM2AQ8IVF1 878 aaPredicted RBP18.38■□□□□ 0.53
LIMS4-204ENST00000632897 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
LIMS4-204ENST00000632897 ORAI2Q96SN7 254 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 IFT57Q9NWB7 429 aa18.38■□□□□ 0.53
LIMS4-204ENST00000632897 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
LIMS4-204ENST00000632897 GNAI1P63096 354 aa18.37■□□□□ 0.53
LIMS4-204ENST00000632897 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
LIMS4-204ENST00000632897 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
LIMS4-204ENST00000632897 LTN1O94822 1766 aa18.36■□□□□ 0.53
LIMS4-204ENST00000632897 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
LIMS4-204ENST00000632897 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
LIMS4-204ENST00000632897 FOXO3O43524 673 aa18.33■□□□□ 0.53
LIMS4-204ENST00000632897 IP6K1Q92551 441 aa18.33■□□□□ 0.53
LIMS4-204ENST00000632897 EYA1Q99502 592 aa18.33■□□□□ 0.53
LIMS4-204ENST00000632897 USP19O94966 1318 aa18.33■□□□□ 0.53
LIMS4-204ENST00000632897 MS4A1P11836 297 aa18.33■□□□□ 0.52
LIMS4-204ENST00000632897 RXRBP28702 533 aa18.33■□□□□ 0.52
LIMS4-204ENST00000632897 AAMPQ13685 434 aa18.33■□□□□ 0.52
LIMS4-204ENST00000632897 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.52
LIMS4-204ENST00000632897 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
LIMS4-204ENST00000632897 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
LIMS4-204ENST00000632897 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
LIMS4-204ENST00000632897 AFF2P51816 1311 aa18.32■□□□□ 0.52
LIMS4-204ENST00000632897 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
LIMS4-204ENST00000632897 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
LIMS4-204ENST00000632897 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
LIMS4-204ENST00000632897 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
LIMS4-204ENST00000632897 ZKSCAN2Q63HK3 967 aa18.29■□□□□ 0.52
LIMS4-204ENST00000632897 DDX17Q92841 729 aaKnown RBP18.29■□□□□ 0.52
LIMS4-204ENST00000632897 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
LIMS4-204ENST00000632897 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
LIMS4-204ENST00000632897 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms