RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 BCL11BQ9C0K0 894 aaPredicted RBP7.89□□□□□ -1.15
LINC00550-202ENST00000629570 AHDC1Q5TGY3 1603 aaPredicted RBP7.89□□□□□ -1.15
LINC00550-202ENST00000629570 USP32Q8NFA0 1604 aa7.89□□□□□ -1.15
LINC00550-202ENST00000629570 TULP4Q9NRJ4 1543 aa7.88□□□□□ -1.15
LINC00550-202ENST00000629570 EIF3AQ14152 1382 aaKnown RBP7.88□□□□□ -1.15
LINC00550-202ENST00000629570 PRR36Q9H6K5 1346 aa7.88□□□□□ -1.15
LINC00550-202ENST00000629570 WASLO00401 505 aaPredicted RBP7.88□□□□□ -1.15
LINC00550-202ENST00000629570 COL16A1Q07092 1604 aaPredicted RBP7.88□□□□□ -1.15
LINC00550-202ENST00000629570 ATP7BP35670 1465 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 ANKARQ7Z5J8 1434 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 PHLPP1O60346 1717 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 NLRP6P59044 892 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 ESCO1Q5FWF5 840 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 VARS2Q5ST30 1063 aaKnown RBP7.87□□□□□ -1.15
LINC00550-202ENST00000629570 FBXO22Q8NEZ5 403 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 ZSWIM6Q9HCJ5 1215 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 NHSL1Q5SYE7 1610 aa7.87□□□□□ -1.15
LINC00550-202ENST00000629570 USP47Q96K76 1375 aa7.86□□□□□ -1.15
LINC00550-202ENST00000629570 CDK19Q9BWU1 502 aa7.86□□□□□ -1.15
LINC00550-202ENST00000629570 STK24Q9Y6E0 443 aa7.86□□□□□ -1.15
LINC00550-202ENST00000629570 RGPD8O14715 1765 aaPredicted RBP7.86□□□□□ -1.15
LINC00550-202ENST00000629570 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 FOXO3O43524 673 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 XPCQ01831 940 aaPredicted RBP7.85□□□□□ -1.15
LINC00550-202ENST00000629570 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 TAOK2Q9UL54 1235 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 PXDNQ92626 1479 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 KIF1AQ12756 1690 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 TOPAZ1Q8N9V7 1692 aa7.85□□□□□ -1.15
LINC00550-202ENST00000629570 ST20-MTHFSA0A0A6YYL1 179 aa7.84□□□□□ -1.15
LINC00550-202ENST00000629570 SRPK2P78362 688 aaKnown RBP7.84□□□□□ -1.15
LINC00550-202ENST00000629570 PMFBP1Q8TBY8 1022 aa7.84□□□□□ -1.15
LINC00550-202ENST00000629570 NUDT16Q96DE0 195 aaKnown RBP7.84□□□□□ -1.15
LINC00550-202ENST00000629570 SOS2Q07890 1332 aaPredicted RBP7.83□□□□□ -1.16
LINC00550-202ENST00000629570 NPHP3Q7Z494 1330 aa7.83□□□□□ -1.16
LINC00550-202ENST00000629570 EVC2Q86UK5 1308 aa7.83□□□□□ -1.16
LINC00550-202ENST00000629570 TESK2Q96S53 571 aa7.83□□□□□ -1.16
LINC00550-202ENST00000629570 MFRPQ9BY79 579 aa7.83□□□□□ -1.16
LINC00550-202ENST00000629570 JCADQ9P266 1359 aa7.83□□□□□ -1.16
LINC00550-202ENST00000629570 STK25O00506 426 aa7.82□□□□□ -1.16
LINC00550-202ENST00000629570 ECM2O94769 699 aaPredicted RBP7.82□□□□□ -1.16
LINC00550-202ENST00000629570 ITSN1Q15811 1721 aa7.82□□□□□ -1.16
LINC00550-202ENST00000629570 PPIP5K1Q6PFW1 1433 aa7.82□□□□□ -1.16
LINC00550-202ENST00000629570 PNPLA6Q8IY17 1366 aa7.82□□□□□ -1.16
LINC00550-202ENST00000629570 DISP3Q9P2K9 1392 aa7.82□□□□□ -1.16
LINC00550-202ENST00000629570 MED1Q15648 1581 aaPredicted RBP7.81□□□□□ -1.16
LINC00550-202ENST00000629570 ARSIQ5FYB1 569 aa7.81□□□□□ -1.16
LINC00550-202ENST00000629570 ZNF687Q8N1G0 1237 aa7.81□□□□□ -1.16
LINC00550-202ENST00000629570 SHPRHQ149N8 1683 aa7.81□□□□□ -1.16
LINC00550-202ENST00000629570 POLR3AO14802 1390 aaPredicted RBP7.81□□□□□ -1.16
LINC00550-202ENST00000629570 LRP6O75581 1613 aa7.81□□□□□ -1.16
LINC00550-202ENST00000629570 KRT28Q7Z3Y7 464 aa7.8□□□□□ -1.16
LINC00550-202ENST00000629570 NGDNQ8NEJ9 315 aaKnown RBP7.8□□□□□ -1.16
LINC00550-202ENST00000629570 LRRC59Q96AG4 307 aaKnown RBP7.8□□□□□ -1.16
LINC00550-202ENST00000629570 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
LINC00550-202ENST00000629570 ATAD2Q6PL18 1390 aa7.8□□□□□ -1.16
LINC00550-202ENST00000629570 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
LINC00550-202ENST00000629570 ACEP12821 1306 aa7.79□□□□□ -1.16
LINC00550-202ENST00000629570 TNS3Q68CZ2 1445 aa7.79□□□□□ -1.16
LINC00550-202ENST00000629570 PLEKHG3A1L390 1219 aa7.79□□□□□ -1.16
LINC00550-202ENST00000629570 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
LINC00550-202ENST00000629570 PSME1Q06323 249 aa7.79□□□□□ -1.16
LINC00550-202ENST00000629570 KHSRPQ92945 711 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00550-202ENST00000629570 SBNO1A3KN83 1393 aa7.79□□□□□ -1.16
LINC00550-202ENST00000629570 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
LINC00550-202ENST00000629570 SPATA31A3Q5VYP0 1347 aa7.78□□□□□ -1.16
LINC00550-202ENST00000629570 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
LINC00550-202ENST00000629570 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00550-202ENST00000629570 USP6P35125 1406 aa7.78□□□□□ -1.16
LINC00550-202ENST00000629570 ALS2Q96Q42 1657 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 CD163L1Q9NR16 1453 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 C2orf72A6NCS6 295 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 NUTM2BA6NNL0 878 aaPredicted RBP7.77□□□□□ -1.17
LINC00550-202ENST00000629570 NUTM2EB1AL46 878 aaPredicted RBP7.77□□□□□ -1.17
LINC00550-202ENST00000629570 KIF3CO14782 793 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 RGL2O15211 777 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 TMF1P82094 1093 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 LMOD2Q6P5Q4 547 aa7.77□□□□□ -1.17
LINC00550-202ENST00000629570 NUTM2AQ8IVF1 878 aaPredicted RBP7.77□□□□□ -1.17
LINC00550-202ENST00000629570 RNF166Q96A37 237 aaPredicted RBP7.77□□□□□ -1.17
LINC00550-202ENST00000629570 CPSF1Q10570 1443 aaKnown RBP7.77□□□□□ -1.17
LINC00550-202ENST00000629570 ARHGEF10O15013 1369 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
LINC00550-202ENST00000629570 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 CABLES1Q8TDN4 633 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 SLC12A5Q9H2X9 1139 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 SSH2Q76I76 1423 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 NRKQ7Z2Y5 1582 aa7.76□□□□□ -1.17
LINC00550-202ENST00000629570 ABCA3Q99758 1704 aa7.75□□□□□ -1.17
LINC00550-202ENST00000629570 A0A1W2PP64 1363 aa7.75□□□□□ -1.17
LINC00550-202ENST00000629570 AKAP12Q02952 1782 aa7.75□□□□□ -1.17
LINC00550-202ENST00000629570 ADAMTS2O95450 1211 aa7.75□□□□□ -1.17
LINC00550-202ENST00000629570 NUTM2GQ5VZR2 741 aa7.75□□□□□ -1.17
LINC00550-202ENST00000629570 PUS7Q96PZ0 661 aaKnown RBP7.75□□□□□ -1.17
LINC00550-202ENST00000629570 KTN1Q86UP2 1357 aaKnown RBP7.74□□□□□ -1.17
LINC00550-202ENST00000629570 NINLQ9Y2I6 1382 aa7.74□□□□□ -1.17
LINC00550-202ENST00000629570 PIK3C2AO00443 1686 aa7.74□□□□□ -1.17
LINC00550-202ENST00000629570 MYOM1P52179 1685 aa7.74□□□□□ -1.17
LINC00550-202ENST00000629570 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
LINC00550-202ENST00000629570 SLC24A1O60721 1099 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms