RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 NUCB2P80303 420 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 SARNPP82979 210 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 GPS2Q13227 327 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 BIRC2Q13490 618 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 HDAC1Q13547 482 aaPredicted RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 NOLC1Q14978 699 aaKnown RBP eCLIP2.31□□□□□ -2.04
TCF4-264ENST00000628391 PPP2R5AQ15172 486 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ZSCAN23Q3MJ62 389 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 TSGA10IPQ3SY00 556 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 CDCA8Q53HL2 280 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 HSP90AB4PQ58FF6 505 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 TEX35Q5T0J7 233 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 C20orf194Q5TEA3 1177 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 LRSAM1Q6UWE0 723 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 TSHZ1Q6ZSZ6 1077 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 SRLQ86TD4 932 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ZNF513Q8N8E2 541 aaPredicted RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 FAM184AQ8NB25 1140 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD20A12PQ8NF67 263 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ERCC4Q92889 916 aaPredicted RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 KIF1BPQ96EK5 621 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 CEP89Q96ST8 783 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 NUCKS1Q9H1E3 243 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 RBSNQ9H1K0 784 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ATG3Q9NT62 314 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 DNAJC5BQ9UF47 199 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 DDX49Q9Y6V7 483 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 PARD3Q8TEW0 1356 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 PTPRGP23470 1445 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 NAIPQ13075 1403 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 AQRO60306 1485 aaKnown RBP eCLIP2.31□□□□□ -2.04
TCF4-264ENST00000628391 DENND4BO75064 1496 aaPredicted RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 RALGAPBQ86X10 1494 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ARHGEF12Q9NZN5 1544 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 CEP170Q5SW79 1584 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 CLTCL1P53675 1640 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 SUPT6HQ7KZ85 1726 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD18BA2A2Z9 1011 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD33BA6NCL7 494 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 HTATSF1O43719 755 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 C21orf2O43822 256 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 COQ9O75208 318 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 EIF3JO75822 258 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 IPO7O95373 1038 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 MBD3O95983 291 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 IVLP07476 585 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 MAGEA9P43362 315 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 ZSCAN26Q16670 478 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 UVSSAQ2YD98 709 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 RGL3Q3MIN7 710 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 ZC3H12AQ5D1E8 599 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 JAKMIP3Q5VZ66 844 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 CAVIN1Q6NZI2 390 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 SYT10Q6XYQ8 523 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 MMS22LQ6ZRQ5 1243 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 RINLQ6ZS11 566 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 NUTM1Q86Y26 1132 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 C10orf67Q8IYJ2 551 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 IQUBQ8NA54 791 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 CCDC191Q8NCU4 936 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 GOLGA5Q8TBA6 731 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 ZNF526Q8TF50 670 aaPredicted RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 PPM1EQ8WY54 764 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 TSC1Q92574 1164 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 SYAP1Q96A49 352 aaPredicted RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 DRC1Q96MC2 740 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 TMX1Q9H3N1 280 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 SUDS3Q9H7L9 328 aaPredicted RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 ZNF446Q9NWS9 450 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 ETAA1Q9NY74 926 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 RRP15Q9Y3B9 282 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 V9GYY5 206 aaPredicted RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 SPAG9O60271 1321 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 PTPRCP08575 1304 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 NKTRP30414 1462 aaKnown RBP2.3□□□□□ -2.04
TCF4-264ENST00000628391 SNAPC4Q5SXM2 1469 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 PLB1Q6P1J6 1458 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 KDM5DQ9BY66 1539 aa2.3□□□□□ -2.04
TCF4-264ENST00000628391 GRIN2AQ12879 1464 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 TCOF1Q13428 1488 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 CCDC141Q6ZP82 1450 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 USP47Q96K76 1375 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 IPO8O15397 1037 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 SGSM2O43147 1006 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 CCP110O43303 1012 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 PLIN1O60240 522 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 SMC2O95347 1197 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 BAG4O95429 457 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 SEC24BO95487 1268 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 TPM1P09493 284 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 SETSIPP0DME0 302 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 TNNT1P13805 278 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 PRIM1P49642 420 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 GYS2P54840 703 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 ICA1Q05084 483 aa2.29□□□□□ -2.04
TCF4-264ENST00000628391 BMS1Q14692 1282 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 ZRSR1Q15695 479 aaKnown RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 PDCD2Q16342 344 aaPredicted RBP2.29□□□□□ -2.04
TCF4-264ENST00000628391 CCDC96Q2M329 555 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms