RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 NACAP1Q9BZK3 213 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 FILIP1LQ4L180 1135 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 HSP90B2PQ58FF3 399 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 CCDC57Q2TAC2 916 aa15.24■□□□□ 0.03
SCN8A-209ENST00000627620 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
SCN8A-209ENST00000627620 HSP90AB2PQ58FF8 381 aa15.24■□□□□ 0.03
SCN8A-209ENST00000627620 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 NUTM2BA6NNL0 878 aaPredicted RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 NUTM2EB1AL46 878 aaPredicted RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 KRT18P05783 430 aaKnown RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 ATP2B2Q01814 1243 aa15.24■□□□□ 0.03
SCN8A-209ENST00000627620 NUTM2AQ8IVF1 878 aaPredicted RBP15.24■□□□□ 0.03
SCN8A-209ENST00000627620 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
SCN8A-209ENST00000627620 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCN8A-209ENST00000627620 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
SCN8A-209ENST00000627620 JMYQ8N9B5 988 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 RPGRIP1LQ68CZ1 1315 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 AACSQ86V21 672 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 ANKLE2Q86XL3 938 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
SCN8A-209ENST00000627620 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 CHD1LQ86WJ1 897 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 FKBP4Q02790 459 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCN8A-209ENST00000627620 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
SCN8A-209ENST00000627620 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
SCN8A-209ENST00000627620 FCHSD2O94868 740 aa15.21■□□□□ 0.03
SCN8A-209ENST00000627620 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.03
SCN8A-209ENST00000627620 PIP4K2AP48426 406 aaPredicted RBP15.21■□□□□ 0.03
SCN8A-209ENST00000627620 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.02
SCN8A-209ENST00000627620 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
SCN8A-209ENST00000627620 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
SCN8A-209ENST00000627620 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
SCN8A-209ENST00000627620 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
SCN8A-209ENST00000627620 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
SCN8A-209ENST00000627620 ME1P48163 572 aa15.19■□□□□ 0.02
SCN8A-209ENST00000627620 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
SCN8A-209ENST00000627620 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
SCN8A-209ENST00000627620 DAPK1P53355 1430 aa15.19■□□□□ 0.02
SCN8A-209ENST00000627620 XPCQ01831 940 aaPredicted RBP15.19■□□□□ 0.02
SCN8A-209ENST00000627620 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
SCN8A-209ENST00000627620 NESP48681 1621 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 CCP110O43303 1012 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 IL1RAPL2Q9NP60 686 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 CEP126Q9P2H0 1117 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 BACH2Q9BYV9 841 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 KRI1Q8N9T8 703 aaKnown RBP15.18■□□□□ 0.02
SCN8A-209ENST00000627620 SERPINC1P01008 464 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 KRT85P78386 507 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
SCN8A-209ENST00000627620 SPC24Q8NBT2 197 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
SCN8A-209ENST00000627620 TNMDQ9H2S6 317 aa15.18■□□□□ 0.02
SCN8A-209ENST00000627620 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
SCN8A-209ENST00000627620 SYCP1Q15431 976 aa15.17■□□□□ 0.02
SCN8A-209ENST00000627620 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
SCN8A-209ENST00000627620 PDRG1Q9NUG6 133 aa15.17■□□□□ 0.02
SCN8A-209ENST00000627620 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
SCN8A-209ENST00000627620 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 NSD3Q9BZ95 1437 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 GNAT3A8MTJ3 354 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 ZNHIT6Q9NWK9 470 aaKnown RBP15.16■□□□□ 0.02
SCN8A-209ENST00000627620 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
SCN8A-209ENST00000627620 ZHX3Q9H4I2 956 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 TDO2P48775 406 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 DACH1Q9UI36 760 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
SCN8A-209ENST00000627620 RAI14Q9P0K7 980 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 STIM1Q13586 685 aa15.15■□□□□ 0.02
SCN8A-209ENST00000627620 CDKL5O76039 1030 aa15.14■□□□□ 0.01
SCN8A-209ENST00000627620 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
SCN8A-209ENST00000627620 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
SCN8A-209ENST00000627620 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-209ENST00000627620 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-209ENST00000627620 UBAC1Q9BSL1 405 aa15.14■□□□□ 0.01
SCN8A-209ENST00000627620 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms