RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
CCDC163-201ENST00000625766 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
CCDC163-201ENST00000625766 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
CCDC163-201ENST00000625766 MST1RQ04912 1400 aa15.32■□□□□ 0.04
CCDC163-201ENST00000625766 AMPHP49418 695 aa15.31■□□□□ 0.04
CCDC163-201ENST00000625766 MYH16Q9H6N6 1097 aa15.31■□□□□ 0.04
CCDC163-201ENST00000625766 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
CCDC163-201ENST00000625766 MSH6P52701 1360 aa15.29■□□□□ 0.04
CCDC163-201ENST00000625766 SOX12O15370 315 aa15.29■□□□□ 0.04
CCDC163-201ENST00000625766 HOXC9P31274 260 aa15.29■□□□□ 0.04
CCDC163-201ENST00000625766 PEAK1Q9H792 1746 aa15.29■□□□□ 0.04
CCDC163-201ENST00000625766 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
CCDC163-201ENST00000625766 CT47B1P0C2W7 299 aaPredicted RBP15.28■□□□□ 0.04
CCDC163-201ENST00000625766 IP6K1Q92551 441 aa15.28■□□□□ 0.04
CCDC163-201ENST00000625766 MARF1Q9Y4F3 1742 aaKnown RBP15.27■□□□□ 0.04
CCDC163-201ENST00000625766 KIF1AQ12756 1690 aa15.27■□□□□ 0.04
CCDC163-201ENST00000625766 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
CCDC163-201ENST00000625766 ARHGEF10O15013 1369 aa15.27■□□□□ 0.04
CCDC163-201ENST00000625766 GCP02774 474 aa15.26■□□□□ 0.03
CCDC163-201ENST00000625766 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
CCDC163-201ENST00000625766 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
CCDC163-201ENST00000625766 KDRP35968 1356 aa15.26■□□□□ 0.03
CCDC163-201ENST00000625766 LMOD3Q0VAK6 560 aa15.26■□□□□ 0.03
CCDC163-201ENST00000625766 EYA1Q99502 592 aa15.26■□□□□ 0.03
CCDC163-201ENST00000625766 USP19O94966 1318 aa15.25■□□□□ 0.03
CCDC163-201ENST00000625766 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
CCDC163-201ENST00000625766 ZNF335Q9H4Z2 1342 aaPredicted RBP15.25■□□□□ 0.03
CCDC163-201ENST00000625766 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
CCDC163-201ENST00000625766 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
CCDC163-201ENST00000625766 NPHP3Q7Z494 1330 aa15.24■□□□□ 0.03
CCDC163-201ENST00000625766 RGPD1P0DJD0 1748 aa15.24■□□□□ 0.03
CCDC163-201ENST00000625766 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
CCDC163-201ENST00000625766 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
CCDC163-201ENST00000625766 PLIN1O60240 522 aa15.23■□□□□ 0.03
CCDC163-201ENST00000625766 NFAT5O94916 1531 aa15.23■□□□□ 0.03
CCDC163-201ENST00000625766 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
CCDC163-201ENST00000625766 SLIT3O75094 1523 aa15.22■□□□□ 0.03
CCDC163-201ENST00000625766 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
CCDC163-201ENST00000625766 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
CCDC163-201ENST00000625766 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
CCDC163-201ENST00000625766 TRPM3Q9HCF6 1732 aaPredicted RBP15.22■□□□□ 0.03
CCDC163-201ENST00000625766 BCAR3O75815 825 aa15.21■□□□□ 0.03
CCDC163-201ENST00000625766 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
CCDC163-201ENST00000625766 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
CCDC163-201ENST00000625766 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.02
CCDC163-201ENST00000625766 GNAI1P63096 354 aa15.2■□□□□ 0.02
CCDC163-201ENST00000625766 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
CCDC163-201ENST00000625766 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
CCDC163-201ENST00000625766 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
CCDC163-201ENST00000625766 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
CCDC163-201ENST00000625766 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
CCDC163-201ENST00000625766 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
CCDC163-201ENST00000625766 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
CCDC163-201ENST00000625766 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
CCDC163-201ENST00000625766 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
CCDC163-201ENST00000625766 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
CCDC163-201ENST00000625766 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
CCDC163-201ENST00000625766 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
CCDC163-201ENST00000625766 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
CCDC163-201ENST00000625766 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
CCDC163-201ENST00000625766 DDX17Q92841 729 aaKnown RBP15.17■□□□□ 0.02
CCDC163-201ENST00000625766 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
CCDC163-201ENST00000625766 PXDNQ92626 1479 aa15.16■□□□□ 0.02
CCDC163-201ENST00000625766 CCDC136Q96JN2 1154 aa15.16■□□□□ 0.02
CCDC163-201ENST00000625766 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
CCDC163-201ENST00000625766 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
CCDC163-201ENST00000625766 NBPF6Q5VWK0 638 aa15.15■□□□□ 0.02
CCDC163-201ENST00000625766 NBPF4Q96M43 638 aa15.15■□□□□ 0.02
CCDC163-201ENST00000625766 THUMPD2Q9BTF0 503 aaKnown RBP15.15■□□□□ 0.02
CCDC163-201ENST00000625766 FAM83GA6ND36 823 aa15.15■□□□□ 0.02
CCDC163-201ENST00000625766 CHL1O00533 1208 aa15.15■□□□□ 0.02
CCDC163-201ENST00000625766 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
CCDC163-201ENST00000625766 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
CCDC163-201ENST00000625766 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
CCDC163-201ENST00000625766 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
CCDC163-201ENST00000625766 LTN1O94822 1766 aa15.13■□□□□ 0.01
CCDC163-201ENST00000625766 MBIPQ9NS73 344 aa15.13■□□□□ 0.01
CCDC163-201ENST00000625766 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
CCDC163-201ENST00000625766 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
CCDC163-201ENST00000625766 VAMP4O75379 141 aa15.12■□□□□ 0.01
CCDC163-201ENST00000625766 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
CCDC163-201ENST00000625766 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
CCDC163-201ENST00000625766 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
CCDC163-201ENST00000625766 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
CCDC163-201ENST00000625766 SSH1Q8WYL5 1049 aa15.12■□□□□ 0.01
CCDC163-201ENST00000625766 RTF1Q92541 710 aaKnown RBP15.12■□□□□ 0.01
CCDC163-201ENST00000625766 AAMPQ13685 434 aa15.11■□□□□ 0.01
CCDC163-201ENST00000625766 ANKRD24Q8TF21 1146 aa15.11■□□□□ 0.01
CCDC163-201ENST00000625766 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
CCDC163-201ENST00000625766 MS4A1P11836 297 aa15.1■□□□□ 0.01
CCDC163-201ENST00000625766 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
CCDC163-201ENST00000625766 MCM10Q7L590 875 aa15.1■□□□□ 0.01
CCDC163-201ENST00000625766 CRB1P82279 1406 aa15.1■□□□□ 0.01
CCDC163-201ENST00000625766 CPDO75976 1380 aa15.1■□□□□ 0.01
CCDC163-201ENST00000625766 ZBTB7CA1YPR0 619 aa15.09■□□□□ 0.01
CCDC163-201ENST00000625766 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
CCDC163-201ENST00000625766 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
CCDC163-201ENST00000625766 AMOTQ4VCS5 1084 aa15.08■□□□□ 0.01
CCDC163-201ENST00000625766 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0.01
CCDC163-201ENST00000625766 CANXP27824 592 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms