RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
NPLOC4-221ENST00000625705 STK25O00506 426 aa10.17□□□□□ -0.78
NPLOC4-221ENST00000625705 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
NPLOC4-221ENST00000625705 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
NPLOC4-221ENST00000625705 EVC2Q86UK5 1308 aa10.16□□□□□ -0.78
NPLOC4-221ENST00000625705 FOXO3O43524 673 aa10.16□□□□□ -0.78
NPLOC4-221ENST00000625705 XPCQ01831 940 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-221ENST00000625705 CDK19Q9BWU1 502 aa10.16□□□□□ -0.78
NPLOC4-221ENST00000625705 JCADQ9P266 1359 aa10.15□□□□□ -0.78
NPLOC4-221ENST00000625705 USP32Q8NFA0 1604 aa10.15□□□□□ -0.78
NPLOC4-221ENST00000625705 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-221ENST00000625705 PMFBP1Q8TBY8 1022 aa10.15□□□□□ -0.78
NPLOC4-221ENST00000625705 USP47Q96K76 1375 aa10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 NLRP6P59044 892 aa10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 PSME1Q06323 249 aa10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-221ENST00000625705 SHPRHQ149N8 1683 aa10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 ATP7BP35670 1465 aa10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 DISP3Q9P2K9 1392 aa10.13□□□□□ -0.79
NPLOC4-221ENST00000625705 PRR36Q9H6K5 1346 aa10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 HOXB3P14651 431 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 KRT28Q7Z3Y7 464 aa10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
NPLOC4-221ENST00000625705 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 EMP3P54852 163 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 SBNO2Q9Y2G9 1366 aa10.11□□□□□ -0.79
NPLOC4-221ENST00000625705 PXDNQ92626 1479 aa10.1□□□□□ -0.79
NPLOC4-221ENST00000625705 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-221ENST00000625705 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
NPLOC4-221ENST00000625705 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
NPLOC4-221ENST00000625705 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
NPLOC4-221ENST00000625705 TNS3Q68CZ2 1445 aa10.09□□□□□ -0.79
NPLOC4-221ENST00000625705 TMF1P82094 1093 aa10.09□□□□□ -0.79
NPLOC4-221ENST00000625705 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
NPLOC4-221ENST00000625705 ACEP12821 1306 aa10.08□□□□□ -0.8
NPLOC4-221ENST00000625705 EIF4G2P78344 907 aaKnown RBP eCLIP10.08□□□□□ -0.8
NPLOC4-221ENST00000625705 POLR3GLQ9BT43 218 aa10.08□□□□□ -0.8
NPLOC4-221ENST00000625705 ARHGEF10O15013 1369 aa10.08□□□□□ -0.8
NPLOC4-221ENST00000625705 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 CABP1Q9NZU7 370 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
NPLOC4-221ENST00000625705 TRPM3Q9HCF6 1732 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-221ENST00000625705 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-221ENST00000625705 POLR3AO14802 1390 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 LRP6O75581 1613 aa10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 PLEKHG3A1L390 1219 aa10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 HDGFL2Q7Z4V5 671 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
NPLOC4-221ENST00000625705 POTEB3A0JP26 581 aa10.04□□□□□ -0.8
NPLOC4-221ENST00000625705 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-221ENST00000625705 POTEBQ6S5H4 581 aa10.04□□□□□ -0.8
NPLOC4-221ENST00000625705 TESK2Q96S53 571 aa10.04□□□□□ -0.8
NPLOC4-221ENST00000625705 TERF2IPQ9NYB0 399 aa10.04□□□□□ -0.8
NPLOC4-221ENST00000625705 AKAP12Q02952 1782 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 KTN1Q86UP2 1357 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 USP6P35125 1406 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 CABLES1Q8TDN4 633 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 NGLY1Q96IV0 654 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
NPLOC4-221ENST00000625705 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.8
NPLOC4-221ENST00000625705 ABCA3Q99758 1704 aa10.02□□□□□ -0.8
NPLOC4-221ENST00000625705 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.8
NPLOC4-221ENST00000625705 MON2Q7Z3U7 1717 aa10.02□□□□□ -0.81
NPLOC4-221ENST00000625705 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 SLC12A5Q9H2X9 1139 aa10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 AFF2P51816 1311 aa10.01□□□□□ -0.81
NPLOC4-221ENST00000625705 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
NPLOC4-221ENST00000625705 ZNF772Q68DY9 489 aaPredicted RBP10□□□□□ -0.81
NPLOC4-221ENST00000625705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10□□□□□ -0.812e-6■■■■□ 23
NPLOC4-221ENST00000625705 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
NPLOC4-221ENST00000625705 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
NPLOC4-221ENST00000625705 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
NPLOC4-221ENST00000625705 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
NPLOC4-221ENST00000625705 NRKQ7Z2Y5 1582 aa9.99□□□□□ -0.81
NPLOC4-221ENST00000625705 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
NPLOC4-221ENST00000625705 CPSF1Q10570 1443 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms