RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
TREX1-205ENST00000625293 RGPD8O14715 1765 aaPredicted RBP25.61■■□□□ 1.69
TREX1-205ENST00000625293 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
TREX1-205ENST00000625293 PMFBP1Q8TBY8 1022 aa25.6■■□□□ 1.69
TREX1-205ENST00000625293 MYH16Q9H6N6 1097 aa25.58■■□□□ 1.69
TREX1-205ENST00000625293 BCAR3O75815 825 aa25.57■■□□□ 1.68
TREX1-205ENST00000625293 IL16Q14005 1332 aa25.57■■□□□ 1.68
TREX1-205ENST00000625293 PRKAR2BP31323 418 aa25.56■■□□□ 1.68
TREX1-205ENST00000625293 ESCO1Q5FWF5 840 aa25.56■■□□□ 1.68
TREX1-205ENST00000625293 NGDNQ8NEJ9 315 aaKnown RBP25.55■■□□□ 1.68
TREX1-205ENST00000625293 RIPK4P57078 832 aa25.54■■□□□ 1.68
TREX1-205ENST00000625293 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
TREX1-205ENST00000625293 PEAK1Q9H792 1746 aa25.53■■□□□ 1.68
TREX1-205ENST00000625293 RARSP54136 660 aaKnown RBP25.51■■□□□ 1.67
TREX1-205ENST00000625293 FANCIQ9NVI1 1328 aa25.51■■□□□ 1.67
TREX1-205ENST00000625293 HMOX1P09601 288 aa25.51■■□□□ 1.67
TREX1-205ENST00000625293 PHACTR3Q96KR7 559 aa25.51■■□□□ 1.67
TREX1-205ENST00000625293 USP54Q70EL1 1684 aa25.51■■□□□ 1.67
TREX1-205ENST00000625293 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
TREX1-205ENST00000625293 NFE2L2Q16236 605 aa25.5■■□□□ 1.67
TREX1-205ENST00000625293 FOXO3O43524 673 aa25.49■■□□□ 1.67
TREX1-205ENST00000625293 CT47B1P0C2W7 299 aaPredicted RBP25.49■■□□□ 1.67
TREX1-205ENST00000625293 XPCQ01831 940 aaPredicted RBP25.49■■□□□ 1.67
TREX1-205ENST00000625293 EIF4A2Q14240 407 aaKnown RBP25.49■■□□□ 1.67
TREX1-205ENST00000625293 RBM19Q9Y4C8 960 aaKnown RBP25.49■■□□□ 1.67
TREX1-205ENST00000625293 PDE3AQ14432 1141 aa25.47■■□□□ 1.67
TREX1-205ENST00000625293 NEFMP07197 916 aa25.46■■□□□ 1.67
TREX1-205ENST00000625293 RGPD1P0DJD0 1748 aa25.46■■□□□ 1.67
TREX1-205ENST00000625293 MARF1Q9Y4F3 1742 aaKnown RBP25.46■■□□□ 1.67
TREX1-205ENST00000625293 TSR2Q969E8 191 aaKnown RBP25.45■■□□□ 1.66
TREX1-205ENST00000625293 COL16A1Q07092 1604 aaPredicted RBP25.45■■□□□ 1.66
TREX1-205ENST00000625293 MAP3K19Q56UN5 1328 aa25.44■■□□□ 1.66
TREX1-205ENST00000625293 AHDC1Q5TGY3 1603 aaPredicted RBP25.44■■□□□ 1.66
TREX1-205ENST00000625293 SBNO1A3KN83 1393 aa25.44■■□□□ 1.66
TREX1-205ENST00000625293 PHF8Q9UPP1 1060 aa25.44■■□□□ 1.66
TREX1-205ENST00000625293 HSP90AB2PQ58FF8 381 aa25.42■■□□□ 1.66
TREX1-205ENST00000625293 FLT4P35916 1363 aa25.41■■□□□ 1.66
TREX1-205ENST00000625293 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
TREX1-205ENST00000625293 EXOSC9Q06265 439 aaKnown RBP25.41■■□□□ 1.66
TREX1-205ENST00000625293 KDM2BQ8NHM5 1336 aa25.4■■□□□ 1.66
TREX1-205ENST00000625293 NLRP6P59044 892 aa25.39■■□□□ 1.65
TREX1-205ENST00000625293 ARHGEF10O15013 1369 aa25.38■■□□□ 1.65
TREX1-205ENST00000625293 KIF24Q5T7B8 1368 aa25.38■■□□□ 1.65
TREX1-205ENST00000625293 SOS2Q07890 1332 aaPredicted RBP25.38■■□□□ 1.65
TREX1-205ENST00000625293 AEBP1Q8IUX7 1158 aa25.38■■□□□ 1.65
TREX1-205ENST00000625293 JCADQ9P266 1359 aa25.36■■□□□ 1.65
TREX1-205ENST00000625293 SOX12O15370 315 aa25.36■■□□□ 1.65
TREX1-205ENST00000625293 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
TREX1-205ENST00000625293 SULT6B1Q6IMI4 303 aa25.36■■□□□ 1.65
TREX1-205ENST00000625293 LRRC59Q96AG4 307 aaKnown RBP25.36■■□□□ 1.65
TREX1-205ENST00000625293 NPHP3Q7Z494 1330 aa25.35■■□□□ 1.65
TREX1-205ENST00000625293 ZNF853P0CG23 659 aa25.35■■□□□ 1.65
TREX1-205ENST00000625293 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
TREX1-205ENST00000625293 LMOD3Q0VAK6 560 aa25.35■■□□□ 1.65
TREX1-205ENST00000625293 KRT28Q7Z3Y7 464 aa25.34■■□□□ 1.65
TREX1-205ENST00000625293 PANK1Q8TE04 598 aa25.34■■□□□ 1.65
TREX1-205ENST00000625293 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
TREX1-205ENST00000625293 ABTB2Q8N961 1025 aa25.33■■□□□ 1.65
TREX1-205ENST00000625293 FRAT1Q92837 279 aaPredicted RBP25.33■■□□□ 1.65
TREX1-205ENST00000625293 IFT57Q9NWB7 429 aa25.33■■□□□ 1.65
TREX1-205ENST00000625293 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
TREX1-205ENST00000625293 KDRP35968 1356 aa25.33■■□□□ 1.65
TREX1-205ENST00000625293 PXDNQ92626 1479 aa25.32■■□□□ 1.64
TREX1-205ENST00000625293 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
TREX1-205ENST00000625293 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
TREX1-205ENST00000625293 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
TREX1-205ENST00000625293 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
TREX1-205ENST00000625293 CENPQQ7L2Z9 268 aaPredicted RBP25.31■■□□□ 1.64
TREX1-205ENST00000625293 PSME1Q06323 249 aa25.31■■□□□ 1.64
TREX1-205ENST00000625293 SSH1Q8WYL5 1049 aa25.31■■□□□ 1.64
TREX1-205ENST00000625293 IGSF1Q8N6C5 1336 aa25.31■■□□□ 1.64
TREX1-205ENST00000625293 MED1Q15648 1581 aaPredicted RBP25.3■■□□□ 1.64
TREX1-205ENST00000625293 RLBP1P12271 317 aa25.3■■□□□ 1.64
TREX1-205ENST00000625293 AMPHP49418 695 aa25.3■■□□□ 1.64
TREX1-205ENST00000625293 GNAI1P63096 354 aa25.3■■□□□ 1.64
TREX1-205ENST00000625293 TNNQ9UQP3 1299 aa25.3■■□□□ 1.64
TREX1-205ENST00000625293 COG6Q9Y2V7 657 aa25.3■■□□□ 1.64
TREX1-205ENST00000625293 PAK3O75914 559 aaPredicted RBP25.29■■□□□ 1.64
TREX1-205ENST00000625293 NUTM2GQ5VZR2 741 aa25.29■■□□□ 1.64
TREX1-205ENST00000625293 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
TREX1-205ENST00000625293 PLEKHG5O94827 1062 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 HOXC9P31274 260 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 RTL1A6NKG5 1358 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 NFAT5O94916 1531 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 AAMPQ13685 434 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 ZKSCAN2Q63HK3 967 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 SMC4Q9NTJ3 1288 aa25.28■■□□□ 1.64
TREX1-205ENST00000625293 ALDH1L2Q3SY69 923 aa25.27■■□□□ 1.64
TREX1-205ENST00000625293 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
TREX1-205ENST00000625293 CFAP44Q96MT7 982 aa25.27■■□□□ 1.64
TREX1-205ENST00000625293 CLUAP1Q96AJ1 413 aa25.26■■□□□ 1.63
TREX1-205ENST00000625293 EYA1Q99502 592 aa25.26■■□□□ 1.63
TREX1-205ENST00000625293 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
TREX1-205ENST00000625293 FAM83GA6ND36 823 aa25.26■■□□□ 1.63
TREX1-205ENST00000625293 MBIPQ9NS73 344 aa25.26■■□□□ 1.63
TREX1-205ENST00000625293 LRP6O75581 1613 aa25.25■■□□□ 1.63
TREX1-205ENST00000625293 SPATA31A3Q5VYP0 1347 aa25.24■■□□□ 1.63
TREX1-205ENST00000625293 BRPF1P55201 1214 aaPredicted RBP25.24■■□□□ 1.63
TREX1-205ENST00000625293 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
TREX1-205ENST00000625293 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms