RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 FLT4P35916 1363 aa26.03■■□□□ 1.76
PCDHB12-202ENST00000622978 RGPD1P0DJD0 1748 aa26.03■■□□□ 1.76
PCDHB12-202ENST00000622978 CANXP27824 592 aaKnown RBP26.03■■□□□ 1.76
PCDHB12-202ENST00000622978 HSP90AB2PQ58FF8 381 aa26.02■■□□□ 1.76
PCDHB12-202ENST00000622978 PDE3AQ14432 1141 aa26.01■■□□□ 1.75
PCDHB12-202ENST00000622978 MSH5O43196 834 aa26■■□□□ 1.75
PCDHB12-202ENST00000622978 PAK3O75914 559 aaPredicted RBP25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 CALD1Q05682 793 aaKnown RBP25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 ABTB2Q8N961 1025 aa25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 DLG5Q8TDM6 1919 aa25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 LMOD3Q0VAK6 560 aa25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 ESCO1Q5FWF5 840 aa25.99■■□□□ 1.75
PCDHB12-202ENST00000622978 EXOSC9Q06265 439 aaKnown RBP25.98■■□□□ 1.75
PCDHB12-202ENST00000622978 SULT6B1Q6IMI4 303 aa25.98■■□□□ 1.75
PCDHB12-202ENST00000622978 PROSER2Q86WR7 435 aaPredicted RBP25.97■■□□□ 1.75
PCDHB12-202ENST00000622978 FRAT1Q92837 279 aaPredicted RBP25.97■■□□□ 1.75
PCDHB12-202ENST00000622978 ARHGEF10O15013 1369 aa25.96■■□□□ 1.75
PCDHB12-202ENST00000622978 KIF24Q5T7B8 1368 aa25.96■■□□□ 1.75
PCDHB12-202ENST00000622978 AMPHP49418 695 aa25.96■■□□□ 1.75
PCDHB12-202ENST00000622978 AEBP1Q8IUX7 1158 aa25.96■■□□□ 1.75
PCDHB12-202ENST00000622978 NUTM2GQ5VZR2 741 aa25.95■■□□□ 1.75
PCDHB12-202ENST00000622978 BCL2L13Q9BXK5 485 aa25.94■■□□□ 1.74
PCDHB12-202ENST00000622978 PSME1Q06323 249 aa25.93■■□□□ 1.74
PCDHB12-202ENST00000622978 THUMPD2Q9BTF0 503 aaKnown RBP25.91■■□□□ 1.74
PCDHB12-202ENST00000622978 IFT57Q9NWB7 429 aa25.91■■□□□ 1.74
PCDHB12-202ENST00000622978 GNAI1P63096 354 aa25.9■■□□□ 1.74
PCDHB12-202ENST00000622978 PANK1Q8TE04 598 aa25.9■■□□□ 1.74
PCDHB12-202ENST00000622978 LAS1LQ9Y4W2 734 aaKnown RBP25.9■■□□□ 1.74
PCDHB12-202ENST00000622978 KIF1AQ12756 1690 aa25.89■■□□□ 1.73
PCDHB12-202ENST00000622978 RTL1A6NKG5 1358 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 HOXC9P31274 260 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 SMC4Q9NTJ3 1288 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
PCDHB12-202ENST00000622978 COG6Q9Y2V7 657 aa25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 IGSF1Q8N6C5 1336 aa25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 KDRP35968 1356 aa25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 LTN1O94822 1766 aa25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 CENPQQ7L2Z9 268 aaPredicted RBP25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 NFAT5O94916 1531 aa25.87■■□□□ 1.73
PCDHB12-202ENST00000622978 STRCP1A6NGW2 1772 aa25.86■■□□□ 1.73
PCDHB12-202ENST00000622978 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
PCDHB12-202ENST00000622978 C1orf167Q5SNV9 1468 aa25.86■■□□□ 1.73
PCDHB12-202ENST00000622978 KDM4FA0A1W2PPD8 638 aa25.86■■□□□ 1.73
PCDHB12-202ENST00000622978 ZKSCAN2Q63HK3 967 aa25.86■■□□□ 1.73
PCDHB12-202ENST00000622978 SSH1Q8WYL5 1049 aa25.85■■□□□ 1.73
PCDHB12-202ENST00000622978 CFAP44Q96MT7 982 aa25.84■■□□□ 1.73
PCDHB12-202ENST00000622978 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
PCDHB12-202ENST00000622978 FAM83GA6ND36 823 aa25.84■■□□□ 1.73
PCDHB12-202ENST00000622978 ZNF428Q96B54 188 aa25.84■■□□□ 1.73
PCDHB12-202ENST00000622978 EYA1Q99502 592 aa25.84■■□□□ 1.73
PCDHB12-202ENST00000622978 TMEM94Q12767 1356 aa25.83■■□□□ 1.73
PCDHB12-202ENST00000622978 FOXO3O43524 673 aa25.83■■□□□ 1.73
PCDHB12-202ENST00000622978 HSPA2P54652 639 aa25.83■■□□□ 1.73
PCDHB12-202ENST00000622978 DCCP43146 1447 aa25.83■■□□□ 1.73
PCDHB12-202ENST00000622978 MS4A1P11836 297 aa25.83■■□□□ 1.72
PCDHB12-202ENST00000622978 RLBP1P12271 317 aa25.83■■□□□ 1.72
PCDHB12-202ENST00000622978 AAMPQ13685 434 aa25.83■■□□□ 1.72
PCDHB12-202ENST00000622978 ALDH1L2Q3SY69 923 aa25.83■■□□□ 1.72
PCDHB12-202ENST00000622978 MBIPQ9NS73 344 aa25.83■■□□□ 1.72
PCDHB12-202ENST00000622978 KCNH5Q8NCM2 988 aa25.82■■□□□ 1.72
PCDHB12-202ENST00000622978 CLUAP1Q96AJ1 413 aa25.82■■□□□ 1.72
PCDHB12-202ENST00000622978 TRPM3Q9HCF6 1732 aaPredicted RBP25.82■■□□□ 1.72
PCDHB12-202ENST00000622978 TNNQ9UQP3 1299 aa25.81■■□□□ 1.72
PCDHB12-202ENST00000622978 KIF16BQ96L93 1317 aa25.81■■□□□ 1.72
PCDHB12-202ENST00000622978 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
PCDHB12-202ENST00000622978 DCTN1Q14203 1278 aa25.8■■□□□ 1.72
PCDHB12-202ENST00000622978 PHRF1Q9P1Y6 1649 aaKnown RBP25.8■■□□□ 1.72
PCDHB12-202ENST00000622978 FTSJ3Q8IY81 847 aaKnown RBP25.79■■□□□ 1.72
PCDHB12-202ENST00000622978 ATF3P18847 181 aa25.79■■□□□ 1.72
PCDHB12-202ENST00000622978 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
PCDHB12-202ENST00000622978 DZIP1LQ8IYY4 767 aaKnown RBP25.79■■□□□ 1.72
PCDHB12-202ENST00000622978 MST1RQ04912 1400 aa25.78■■□□□ 1.72
PCDHB12-202ENST00000622978 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
PCDHB12-202ENST00000622978 SLIT3O75094 1523 aa25.78■■□□□ 1.72
PCDHB12-202ENST00000622978 LMTK3Q96Q04 1460 aa25.77■■□□□ 1.72
PCDHB12-202ENST00000622978 IP6K1Q92551 441 aa25.77■■□□□ 1.72
PCDHB12-202ENST00000622978 MVPQ14764 893 aaKnown RBP25.76■■□□□ 1.71
PCDHB12-202ENST00000622978 ATF7IPQ6VMQ6 1270 aa25.76■■□□□ 1.71
PCDHB12-202ENST00000622978 TRIM27P14373 513 aa25.76■■□□□ 1.71
PCDHB12-202ENST00000622978 NOB1Q9ULX3 412 aaKnown RBP25.76■■□□□ 1.71
PCDHB12-202ENST00000622978 IPO8O15397 1037 aaKnown RBP25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 VAMP4O75379 141 aa25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 MTHFSDQ2M296 383 aaKnown RBP25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 GAS2L2Q8NHY3 880 aa25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 BRPF1P55201 1214 aaPredicted RBP25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 MCM10Q7L590 875 aa25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 LTV1Q96GA3 475 aaPredicted RBP25.75■■□□□ 1.71
PCDHB12-202ENST00000622978 TSPYL6Q8N831 410 aa25.73■■□□□ 1.71
PCDHB12-202ENST00000622978 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
PCDHB12-202ENST00000622978 USP19O94966 1318 aa25.72■■□□□ 1.71
PCDHB12-202ENST00000622978 RTF1Q92541 710 aaKnown RBP25.72■■□□□ 1.71
PCDHB12-202ENST00000622978 STRCQ7RTU9 1775 aa25.71■■□□□ 1.71
PCDHB12-202ENST00000622978 LMOD2Q6P5Q4 547 aa25.71■■□□□ 1.71
PCDHB12-202ENST00000622978 CRB1P82279 1406 aa25.71■■□□□ 1.71
PCDHB12-202ENST00000622978 ALS2Q96Q42 1657 aa25.71■■□□□ 1.71
PCDHB12-202ENST00000622978 CHL1O00533 1208 aa25.7■■□□□ 1.71
PCDHB12-202ENST00000622978 GCP02774 474 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms