RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
PCDHB2-202ENST00000622947 BCAR3O75815 825 aa24.04■■□□□ 1.44
PCDHB2-202ENST00000622947 PAK3O75914 559 aaPredicted RBP24.04■■□□□ 1.44
PCDHB2-202ENST00000622947 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
PCDHB2-202ENST00000622947 LMTK3Q96Q04 1460 aa24.04■■□□□ 1.44
PCDHB2-202ENST00000622947 RGPD1P0DJD0 1748 aa24.03■■□□□ 1.44
PCDHB2-202ENST00000622947 AEBP1Q8IUX7 1158 aa24.02■■□□□ 1.44
PCDHB2-202ENST00000622947 ANO8Q9HCE9 1232 aaPredicted RBP24.01■■□□□ 1.43
PCDHB2-202ENST00000622947 STRCQ7RTU9 1775 aa24.01■■□□□ 1.43
PCDHB2-202ENST00000622947 DLG5Q8TDM6 1919 aa24.01■■□□□ 1.43
PCDHB2-202ENST00000622947 TSR2Q969E8 191 aaKnown RBP24■■□□□ 1.43
PCDHB2-202ENST00000622947 CRBNQ96SW2 442 aa24■■□□□ 1.43
PCDHB2-202ENST00000622947 C19orf44Q9H6X5 657 aa24■■□□□ 1.43
PCDHB2-202ENST00000622947 TMEM94Q12767 1356 aa23.99■■□□□ 1.43
PCDHB2-202ENST00000622947 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
PCDHB2-202ENST00000622947 SBNO1A3KN83 1393 aa23.99■■□□□ 1.43
PCDHB2-202ENST00000622947 FOXO3O43524 673 aa23.98■■□□□ 1.43
PCDHB2-202ENST00000622947 PSME1Q06323 249 aa23.98■■□□□ 1.43
PCDHB2-202ENST00000622947 SULT6B1Q6IMI4 303 aa23.98■■□□□ 1.43
PCDHB2-202ENST00000622947 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
PCDHB2-202ENST00000622947 FLT4P35916 1363 aa23.97■■□□□ 1.43
PCDHB2-202ENST00000622947 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
PCDHB2-202ENST00000622947 C1orf167Q5SNV9 1468 aa23.97■■□□□ 1.43
PCDHB2-202ENST00000622947 MYH16Q9H6N6 1097 aa23.96■■□□□ 1.43
PCDHB2-202ENST00000622947 THUMPD2Q9BTF0 503 aaKnown RBP23.95■■□□□ 1.42
PCDHB2-202ENST00000622947 IL16Q14005 1332 aa23.94■■□□□ 1.42
PCDHB2-202ENST00000622947 RARSP54136 660 aaKnown RBP23.94■■□□□ 1.42
PCDHB2-202ENST00000622947 NEFMP07197 916 aa23.94■■□□□ 1.42
PCDHB2-202ENST00000622947 AMPHP49418 695 aa23.94■■□□□ 1.42
PCDHB2-202ENST00000622947 LTN1O94822 1766 aa23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 HOXC9P31274 260 aa23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 MST1RQ04912 1400 aa23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 TRPM3Q9HCF6 1732 aaPredicted RBP23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 NFAT5O94916 1531 aa23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 XIRP1Q702N8 1843 aaKnown RBP23.92■■□□□ 1.42
PCDHB2-202ENST00000622947 EXOSC9Q06265 439 aaKnown RBP23.91■■□□□ 1.42
PCDHB2-202ENST00000622947 FAM83GA6ND36 823 aa23.9■■□□□ 1.42
PCDHB2-202ENST00000622947 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.9■■□□□ 1.42
PCDHB2-202ENST00000622947 EYA1Q99502 592 aa23.89■■□□□ 1.41
PCDHB2-202ENST00000622947 BCL2L13Q9BXK5 485 aa23.89■■□□□ 1.41
PCDHB2-202ENST00000622947 ARHGEF10O15013 1369 aa23.88■■□□□ 1.41
PCDHB2-202ENST00000622947 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
PCDHB2-202ENST00000622947 KIF24Q5T7B8 1368 aa23.87■■□□□ 1.41
PCDHB2-202ENST00000622947 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
PCDHB2-202ENST00000622947 IGSF1Q8N6C5 1336 aa23.87■■□□□ 1.41
PCDHB2-202ENST00000622947 ATF3P18847 181 aa23.87■■□□□ 1.41
PCDHB2-202ENST00000622947 KDRP35968 1356 aa23.86■■□□□ 1.41
PCDHB2-202ENST00000622947 DCCP43146 1447 aa23.86■■□□□ 1.41
PCDHB2-202ENST00000622947 DCTN1Q14203 1278 aa23.86■■□□□ 1.41
PCDHB2-202ENST00000622947 KRT28Q7Z3Y7 464 aa23.86■■□□□ 1.41
PCDHB2-202ENST00000622947 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
PCDHB2-202ENST00000622947 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
PCDHB2-202ENST00000622947 LAS1LQ9Y4W2 734 aaKnown RBP23.83■■□□□ 1.41
PCDHB2-202ENST00000622947 ZNF853P0CG23 659 aa23.83■■□□□ 1.4
PCDHB2-202ENST00000622947 FRAT1Q92837 279 aaPredicted RBP23.83■■□□□ 1.4
PCDHB2-202ENST00000622947 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
PCDHB2-202ENST00000622947 SLIT3O75094 1523 aa23.82■■□□□ 1.4
PCDHB2-202ENST00000622947 ZNF335Q9H4Z2 1342 aaPredicted RBP23.82■■□□□ 1.4
PCDHB2-202ENST00000622947 PANK1Q8TE04 598 aa23.82■■□□□ 1.4
PCDHB2-202ENST00000622947 LTV1Q96GA3 475 aaPredicted RBP23.82■■□□□ 1.4
PCDHB2-202ENST00000622947 RTL1A6NKG5 1358 aa23.81■■□□□ 1.4
PCDHB2-202ENST00000622947 CT47B1P0C2W7 299 aaPredicted RBP23.81■■□□□ 1.4
PCDHB2-202ENST00000622947 ALS2Q96Q42 1657 aa23.81■■□□□ 1.4
PCDHB2-202ENST00000622947 GCP02774 474 aa23.8■■□□□ 1.4
PCDHB2-202ENST00000622947 LMOD2Q6P5Q4 547 aa23.8■■□□□ 1.4
PCDHB2-202ENST00000622947 IP6K1Q92551 441 aa23.8■■□□□ 1.4
PCDHB2-202ENST00000622947 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
PCDHB2-202ENST00000622947 PHRF1Q9P1Y6 1649 aaKnown RBP23.8■■□□□ 1.4
PCDHB2-202ENST00000622947 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 KCNH5Q8NCM2 988 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 SSH1Q8WYL5 1049 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 MBIPQ9NS73 344 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 USP19O94966 1318 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 RLBP1P12271 317 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
PCDHB2-202ENST00000622947 MCM10Q7L590 875 aa23.78■■□□□ 1.4
PCDHB2-202ENST00000622947 RGPD2P0DJD1 1756 aa23.77■■□□□ 1.4
PCDHB2-202ENST00000622947 MSH6P52701 1360 aa23.77■■□□□ 1.4
PCDHB2-202ENST00000622947 CFAP44Q96MT7 982 aa23.77■■□□□ 1.4
PCDHB2-202ENST00000622947 NOP58Q9Y2X3 529 aaKnown RBP23.77■■□□□ 1.4
PCDHB2-202ENST00000622947 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 GNAI1P63096 354 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 ARHGEF25Q86VW2 580 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 TSPYL6Q8N831 410 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 USHBP1Q8N6Y0 703 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 COG6Q9Y2V7 657 aa23.76■■□□□ 1.39
PCDHB2-202ENST00000622947 MED1Q15648 1581 aaPredicted RBP23.75■■□□□ 1.39
PCDHB2-202ENST00000622947 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
PCDHB2-202ENST00000622947 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
PCDHB2-202ENST00000622947 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
PCDHB2-202ENST00000622947 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
PCDHB2-202ENST00000622947 VAMP4O75379 141 aa23.72■■□□□ 1.39
PCDHB2-202ENST00000622947 CRB1P82279 1406 aa23.71■■□□□ 1.39
PCDHB2-202ENST00000622947 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
PCDHB2-202ENST00000622947 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
PCDHB2-202ENST00000622947 PXDNQ92626 1479 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms