RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 FBLN1P23142 703 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 FYB1O15117 783 aa19.39■□□□□ 0.69
GABRB3-215ENST00000622697 SDF4Q9BRK5 362 aa19.39■□□□□ 0.69
GABRB3-215ENST00000622697 NUTM1Q86Y26 1132 aa19.39■□□□□ 0.69
GABRB3-215ENST00000622697 GOLGA6L1Q8N7Z2 621 aa19.39■□□□□ 0.69
GABRB3-215ENST00000622697 XPCQ01831 940 aaPredicted RBP19.38■□□□□ 0.69
GABRB3-215ENST00000622697 CWC27Q6UX04 472 aaKnown RBP19.38■□□□□ 0.69
GABRB3-215ENST00000622697 SPC24Q8NBT2 197 aa19.38■□□□□ 0.69
GABRB3-215ENST00000622697 TBC1D2Q9BYX2 928 aa19.38■□□□□ 0.69
GABRB3-215ENST00000622697 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
GABRB3-215ENST00000622697 CWC22Q9HCG8 908 aaKnown RBP19.37■□□□□ 0.69
GABRB3-215ENST00000622697 TRIM5Q9C035 493 aa19.37■□□□□ 0.69
GABRB3-215ENST00000622697 CCDC61Q9Y6R9 512 aa19.37■□□□□ 0.69
GABRB3-215ENST00000622697 CCDC173Q0VFZ6 552 aa19.37■□□□□ 0.69
GABRB3-215ENST00000622697 GPATCH8Q9UKJ3 1502 aaKnown RBP19.37■□□□□ 0.69
GABRB3-215ENST00000622697 TSR1Q2NL82 804 aaKnown RBP19.37■□□□□ 0.69
GABRB3-215ENST00000622697 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
GABRB3-215ENST00000622697 FBXO31Q5XUX0 539 aaPredicted RBP19.36■□□□□ 0.69
GABRB3-215ENST00000622697 F6X3S4 739 aa19.36■□□□□ 0.69
GABRB3-215ENST00000622697 TNNT3P45378 269 aaPredicted RBP19.36■□□□□ 0.69
GABRB3-215ENST00000622697 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
GABRB3-215ENST00000622697 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
GABRB3-215ENST00000622697 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
GABRB3-215ENST00000622697 ERICH2A1L162 156 aa19.35■□□□□ 0.69
GABRB3-215ENST00000622697 TPM1P09493 284 aa19.35■□□□□ 0.69
GABRB3-215ENST00000622697 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
GABRB3-215ENST00000622697 ATP2B1P20020 1258 aa19.34■□□□□ 0.69
GABRB3-215ENST00000622697 AACSQ86V21 672 aa19.34■□□□□ 0.69
GABRB3-215ENST00000622697 IDI1Q13907 227 aa19.34■□□□□ 0.69
GABRB3-215ENST00000622697 PCMTD1Q96MG8 357 aaPredicted RBP19.34■□□□□ 0.69
GABRB3-215ENST00000622697 NOS1P29475 1434 aa19.34■□□□□ 0.69
GABRB3-215ENST00000622697 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
GABRB3-215ENST00000622697 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
GABRB3-215ENST00000622697 UGGT2Q9NYU1 1516 aa19.33■□□□□ 0.69
GABRB3-215ENST00000622697 UPF3BQ9BZI7 483 aaKnown RBP19.33■□□□□ 0.69
GABRB3-215ENST00000622697 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.68
GABRB3-215ENST00000622697 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
GABRB3-215ENST00000622697 ERC1Q8IUD2 1116 aa19.33■□□□□ 0.68
GABRB3-215ENST00000622697 MTMR7Q9Y216 660 aa19.33■□□□□ 0.68
GABRB3-215ENST00000622697 PROSER2Q86WR7 435 aaPredicted RBP19.32■□□□□ 0.68
GABRB3-215ENST00000622697 USHBP1Q8N6Y0 703 aa19.32■□□□□ 0.68
GABRB3-215ENST00000622697 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
GABRB3-215ENST00000622697 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
GABRB3-215ENST00000622697 JAKMIP1Q96N16 626 aaKnown RBP19.31■□□□□ 0.68
GABRB3-215ENST00000622697 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
GABRB3-215ENST00000622697 FAM83GA6ND36 823 aa19.31■□□□□ 0.68
GABRB3-215ENST00000622697 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
GABRB3-215ENST00000622697 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
GABRB3-215ENST00000622697 ADGRL1O94910 1474 aa19.31■□□□□ 0.68
GABRB3-215ENST00000622697 WDR33Q9C0J8 1336 aaKnown RBP19.31■□□□□ 0.68
GABRB3-215ENST00000622697 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
GABRB3-215ENST00000622697 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
GABRB3-215ENST00000622697 CIZ1Q9ULV3 898 aaPredicted RBP19.3■□□□□ 0.68
GABRB3-215ENST00000622697 HIP1O00291 1037 aa19.3■□□□□ 0.68
GABRB3-215ENST00000622697 PDCP20941 246 aa19.3■□□□□ 0.68
GABRB3-215ENST00000622697 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
GABRB3-215ENST00000622697 LARP1BQ659C4 914 aaKnown RBP19.3■□□□□ 0.68
GABRB3-215ENST00000622697 HOOK1Q9UJC3 728 aaKnown RBP19.29■□□□□ 0.68
GABRB3-215ENST00000622697 PDILTQ8N807 584 aa19.29■□□□□ 0.68
GABRB3-215ENST00000622697 GNAT3A8MTJ3 354 aa19.29■□□□□ 0.68
GABRB3-215ENST00000622697 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
GABRB3-215ENST00000622697 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
GABRB3-215ENST00000622697 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
GABRB3-215ENST00000622697 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
GABRB3-215ENST00000622697 PCDHB15Q9Y5E8 787 aa19.29■□□□□ 0.68
GABRB3-215ENST00000622697 THEMISQ8N1K5 641 aaPredicted RBP19.28■□□□□ 0.68
GABRB3-215ENST00000622697 SYCE3A1L190 88 aa19.28■□□□□ 0.68
GABRB3-215ENST00000622697 SSFA2P28290 1259 aa19.28■□□□□ 0.68
GABRB3-215ENST00000622697 RRP12Q5JTH9 1297 aaKnown RBP19.28■□□□□ 0.68
GABRB3-215ENST00000622697 NOL10Q9BSC4 688 aaKnown RBP19.28■□□□□ 0.68
GABRB3-215ENST00000622697 PDRG1Q9NUG6 133 aa19.28■□□□□ 0.68
GABRB3-215ENST00000622697 ESPNB1AK53 854 aa19.27■□□□□ 0.68
GABRB3-215ENST00000622697 SMC2O95347 1197 aa19.27■□□□□ 0.68
GABRB3-215ENST00000622697 MX1P20591 662 aa19.27■□□□□ 0.68
GABRB3-215ENST00000622697 AMOTL1Q8IY63 956 aa19.27■□□□□ 0.68
GABRB3-215ENST00000622697 CD109Q6YHK3 1445 aa19.27■□□□□ 0.68
GABRB3-215ENST00000622697 TPM2P07951 284 aa19.27■□□□□ 0.67
GABRB3-215ENST00000622697 CABP4P57796 275 aa19.26■□□□□ 0.67
GABRB3-215ENST00000622697 RBM33Q96EV2 1170 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 LARP6Q9BRS8 491 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 CASTP20810 708 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 TNPO1Q92973 898 aaKnown RBP19.26■□□□□ 0.67
GABRB3-215ENST00000622697 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
GABRB3-215ENST00000622697 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
GABRB3-215ENST00000622697 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 ANKRD20A12PQ8NF67 263 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 BLOC1S2Q6QNY1 142 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 TNMDQ9H2S6 317 aa19.25■□□□□ 0.67
GABRB3-215ENST00000622697 FERMT3Q86UX7 667 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
GABRB3-215ENST00000622697 STK38Q15208 465 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 OLFM4Q6UX06 510 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 TBC1D9Q6ZT07 1266 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
GABRB3-215ENST00000622697 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms