RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
SNX12-207ENST00000622277 HMOX1P09601 288 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 RLBP1P12271 317 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
SNX12-207ENST00000622277 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
SNX12-207ENST00000622277 FMN2Q9NZ56 1722 aa16.4■□□□□ 0.22
SNX12-207ENST00000622277 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
SNX12-207ENST00000622277 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
SNX12-207ENST00000622277 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
SNX12-207ENST00000622277 RGPD1P0DJD0 1748 aa16.38■□□□□ 0.21
SNX12-207ENST00000622277 ZKSCAN2Q63HK3 967 aa16.38■□□□□ 0.21
SNX12-207ENST00000622277 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
SNX12-207ENST00000622277 IGHDP01880 384 aa16.37■□□□□ 0.21
SNX12-207ENST00000622277 KCNA6P17658 529 aa16.37■□□□□ 0.21
SNX12-207ENST00000622277 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
SNX12-207ENST00000622277 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
SNX12-207ENST00000622277 PIK3C2AO00443 1686 aa16.36■□□□□ 0.21
SNX12-207ENST00000622277 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
SNX12-207ENST00000622277 EIF4A2Q14240 407 aaKnown RBP16.36■□□□□ 0.21
SNX12-207ENST00000622277 USP54Q70EL1 1684 aa16.36■□□□□ 0.21
SNX12-207ENST00000622277 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
SNX12-207ENST00000622277 MVPQ14764 893 aaKnown RBP16.36■□□□□ 0.21
SNX12-207ENST00000622277 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
SNX12-207ENST00000622277 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
SNX12-207ENST00000622277 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
SNX12-207ENST00000622277 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
SNX12-207ENST00000622277 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
SNX12-207ENST00000622277 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
SNX12-207ENST00000622277 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
SNX12-207ENST00000622277 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
SNX12-207ENST00000622277 ARXQ96QS3 562 aa16.34■□□□□ 0.21
SNX12-207ENST00000622277 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
SNX12-207ENST00000622277 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 TRIM27P14373 513 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 GNAI1P63096 354 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
SNX12-207ENST00000622277 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.2
SNX12-207ENST00000622277 MARF1Q9Y4F3 1742 aaKnown RBP16.32■□□□□ 0.2
SNX12-207ENST00000622277 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
SNX12-207ENST00000622277 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
SNX12-207ENST00000622277 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
SNX12-207ENST00000622277 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
SNX12-207ENST00000622277 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
SNX12-207ENST00000622277 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
SNX12-207ENST00000622277 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
SNX12-207ENST00000622277 MAP3K19Q56UN5 1328 aa16.3■□□□□ 0.2
SNX12-207ENST00000622277 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
SNX12-207ENST00000622277 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
SNX12-207ENST00000622277 FLT4P35916 1363 aa16.3■□□□□ 0.2
SNX12-207ENST00000622277 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
SNX12-207ENST00000622277 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
SNX12-207ENST00000622277 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
SNX12-207ENST00000622277 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
SNX12-207ENST00000622277 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
SNX12-207ENST00000622277 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
SNX12-207ENST00000622277 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
SNX12-207ENST00000622277 VAMP4O75379 141 aa16.28■□□□□ 0.2
SNX12-207ENST00000622277 RGS3P49796 1198 aa16.28■□□□□ 0.2
SNX12-207ENST00000622277 DDX19BQ9UMR2 479 aa16.28■□□□□ 0.2
SNX12-207ENST00000622277 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
SNX12-207ENST00000622277 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
SNX12-207ENST00000622277 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.19
SNX12-207ENST00000622277 VIRMAQ69YN4 1812 aaKnown RBP16.27■□□□□ 0.19
SNX12-207ENST00000622277 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
SNX12-207ENST00000622277 KDRP35968 1356 aa16.26■□□□□ 0.19
SNX12-207ENST00000622277 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
SNX12-207ENST00000622277 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
SNX12-207ENST00000622277 TMEM57Q8N5G2 664 aa16.25■□□□□ 0.19
SNX12-207ENST00000622277 MRPL50Q8N5N7 158 aaKnown RBP16.25■□□□□ 0.19
SNX12-207ENST00000622277 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
SNX12-207ENST00000622277 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
SNX12-207ENST00000622277 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
SNX12-207ENST00000622277 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
SNX12-207ENST00000622277 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
SNX12-207ENST00000622277 SOX12O15370 315 aa16.23■□□□□ 0.19
SNX12-207ENST00000622277 NLRP6P59044 892 aa16.23■□□□□ 0.19
SNX12-207ENST00000622277 HDAC1Q13547 482 aaPredicted RBP16.23■□□□□ 0.19
SNX12-207ENST00000622277 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
SNX12-207ENST00000622277 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
SNX12-207ENST00000622277 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
SNX12-207ENST00000622277 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
SNX12-207ENST00000622277 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
SNX12-207ENST00000622277 AMPHP49418 695 aa16.21■□□□□ 0.19
SNX12-207ENST00000622277 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
SNX12-207ENST00000622277 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
SNX12-207ENST00000622277 CRB1P82279 1406 aa16.21■□□□□ 0.19
SNX12-207ENST00000622277 CHL1O00533 1208 aa16.2■□□□□ 0.18
SNX12-207ENST00000622277 DDRGK1Q96HY6 314 aa16.2■□□□□ 0.18
SNX12-207ENST00000622277 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
SNX12-207ENST00000622277 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
SNX12-207ENST00000622277 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
SNX12-207ENST00000622277 ABCC4O15439 1325 aa16.19■□□□□ 0.18
SNX12-207ENST00000622277 HOXC9P31274 260 aa16.19■□□□□ 0.18
SNX12-207ENST00000622277 EYA1Q99502 592 aa16.19■□□□□ 0.18
SNX12-207ENST00000622277 NFAT5O94916 1531 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms