RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 VAMP4O75379 141 aa12.16□□□□□ -0.46
IGHV3-54-201ENST00000622166 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
IGHV3-54-201ENST00000622166 NUCB1Q02818 461 aa12.16□□□□□ -0.46
IGHV3-54-201ENST00000622166 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
IGHV3-54-201ENST00000622166 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
IGHV3-54-201ENST00000622166 PHACTR3Q96KR7 559 aa12.15□□□□□ -0.46
IGHV3-54-201ENST00000622166 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
IGHV3-54-201ENST00000622166 TOPAZ1Q8N9V7 1692 aa12.15□□□□□ -0.46
IGHV3-54-201ENST00000622166 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
IGHV3-54-201ENST00000622166 UBR1Q8IWV7 1749 aa12.14□□□□□ -0.47
IGHV3-54-201ENST00000622166 NME9Q86XW9 330 aa12.14□□□□□ -0.47
IGHV3-54-201ENST00000622166 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
IGHV3-54-201ENST00000622166 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
IGHV3-54-201ENST00000622166 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
IGHV3-54-201ENST00000622166 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
IGHV3-54-201ENST00000622166 COG3Q96JB2 828 aa12.13□□□□□ -0.47
IGHV3-54-201ENST00000622166 C22orf23Q9BZE7 217 aa12.13□□□□□ -0.47
IGHV3-54-201ENST00000622166 TNRQ92752 1358 aa12.13□□□□□ -0.47
IGHV3-54-201ENST00000622166 KIF13AQ9H1H9 1805 aa12.13□□□□□ -0.47
IGHV3-54-201ENST00000622166 ABCC4O15439 1325 aa12.12□□□□□ -0.47
IGHV3-54-201ENST00000622166 HMOX1P09601 288 aa12.12□□□□□ -0.47
IGHV3-54-201ENST00000622166 FBLN1P23142 703 aa12.12□□□□□ -0.47
IGHV3-54-201ENST00000622166 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
IGHV3-54-201ENST00000622166 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 PRR36Q9H6K5 1346 aa12.11□□□□□ -0.47
IGHV3-54-201ENST00000622166 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
IGHV3-54-201ENST00000622166 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
IGHV3-54-201ENST00000622166 ADAMTS13Q76LX8 1427 aa12.1□□□□□ -0.47
IGHV3-54-201ENST00000622166 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 RBM25P49756 843 aaKnown RBP12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 BMP2KLQ5H9B9 411 aa12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
IGHV3-54-201ENST00000622166 PLEKHG1Q9ULL1 1385 aa12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 MLECQ14165 292 aa12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 SNX21Q969T3 373 aa12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.48
IGHV3-54-201ENST00000622166 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
IGHV3-54-201ENST00000622166 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
IGHV3-54-201ENST00000622166 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
IGHV3-54-201ENST00000622166 CHMP5Q9NZZ3 219 aa12.07□□□□□ -0.48
IGHV3-54-201ENST00000622166 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
IGHV3-54-201ENST00000622166 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 RRS1Q15050 365 aaKnown RBP12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 LNPKQ9C0E8 428 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
IGHV3-54-201ENST00000622166 USP6P35125 1406 aa12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 CHL1O00533 1208 aa12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 EIF5BO60841 1220 aaKnown RBP12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
IGHV3-54-201ENST00000622166 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
IGHV3-54-201ENST00000622166 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
IGHV3-54-201ENST00000622166 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
IGHV3-54-201ENST00000622166 HSCBQ8IWL3 235 aa12.04□□□□□ -0.48
IGHV3-54-201ENST00000622166 MCM4P33991 863 aa12.03□□□□□ -0.48
IGHV3-54-201ENST00000622166 DDIT3P35638 169 aa12.03□□□□□ -0.48
IGHV3-54-201ENST00000622166 ACEP12821 1306 aa12.03□□□□□ -0.48
IGHV3-54-201ENST00000622166 ARHGEF10O15013 1369 aa12.03□□□□□ -0.48
IGHV3-54-201ENST00000622166 RGS12O14924 1447 aa12.03□□□□□ -0.48
IGHV3-54-201ENST00000622166 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.48
IGHV3-54-201ENST00000622166 DCTPP1Q9H773 170 aa12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 CRB1P82279 1406 aa12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 PTPRUQ92729 1446 aa12.02□□□□□ -0.49
IGHV3-54-201ENST00000622166 SLIT1O75093 1534 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 L1TD1Q5T7N2 865 aaKnown RBP12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 PTPRCP08575 1304 aa12.01□□□□□ -0.49
IGHV3-54-201ENST00000622166 USP54Q70EL1 1684 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 CDC45O75419 566 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 DCTN1Q14203 1278 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
IGHV3-54-201ENST00000622166 KIF2CQ99661 725 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 ATP10DQ9P241 1426 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms