RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 DCTN1Q14203 1278 aa24.77■■□□□ 1.56
LAPTM4B-204ENST00000619747 HSP90AB2PQ58FF8 381 aa24.77■■□□□ 1.56
LAPTM4B-204ENST00000619747 PLEKHG3A1L390 1219 aa24.77■■□□□ 1.56
LAPTM4B-204ENST00000619747 FTSJ3Q8IY81 847 aaKnown RBP24.77■■□□□ 1.56
LAPTM4B-204ENST00000619747 MS4A1P11836 297 aa24.76■■□□□ 1.55
LAPTM4B-204ENST00000619747 NFE2L2Q16236 605 aa24.76■■□□□ 1.55
LAPTM4B-204ENST00000619747 GSE1Q14687 1217 aa24.75■■□□□ 1.55
LAPTM4B-204ENST00000619747 NCBP3Q53F19 620 aaKnown RBP24.75■■□□□ 1.55
LAPTM4B-204ENST00000619747 PCDHB15Q9Y5E8 787 aa24.75■■□□□ 1.55
LAPTM4B-204ENST00000619747 ZKSCAN2Q63HK3 967 aa24.75■■□□□ 1.55
LAPTM4B-204ENST00000619747 SULT6B1Q6IMI4 303 aa24.75■■□□□ 1.55
LAPTM4B-204ENST00000619747 EIF4A2Q14240 407 aaKnown RBP24.73■■□□□ 1.55
LAPTM4B-204ENST00000619747 AATKQ6ZMQ8 1374 aa24.73■■□□□ 1.55
LAPTM4B-204ENST00000619747 ARHGAP23Q9P227 1491 aa24.73■■□□□ 1.55
LAPTM4B-204ENST00000619747 NOB1Q9ULX3 412 aaKnown RBP24.73■■□□□ 1.55
LAPTM4B-204ENST00000619747 ZMYND15Q9H091 742 aa24.72■■□□□ 1.55
LAPTM4B-204ENST00000619747 SLIT1O75093 1534 aa24.72■■□□□ 1.55
LAPTM4B-204ENST00000619747 USP6P35125 1406 aa24.72■■□□□ 1.55
LAPTM4B-204ENST00000619747 TRIM27P14373 513 aa24.72■■□□□ 1.55
LAPTM4B-204ENST00000619747 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
LAPTM4B-204ENST00000619747 ITSN1Q15811 1721 aa24.71■■□□□ 1.55
LAPTM4B-204ENST00000619747 MON2Q7Z3U7 1717 aa24.71■■□□□ 1.55
LAPTM4B-204ENST00000619747 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
LAPTM4B-204ENST00000619747 TSPYL6Q8N831 410 aa24.7■■□□□ 1.54
LAPTM4B-204ENST00000619747 IL16Q14005 1332 aa24.69■■□□□ 1.54
LAPTM4B-204ENST00000619747 CDK12Q9NYV4 1490 aaPredicted RBP24.69■■□□□ 1.54
LAPTM4B-204ENST00000619747 C14orf37Q86TY3 774 aa24.69■■□□□ 1.54
LAPTM4B-204ENST00000619747 ITPRIPQ8IWB1 547 aa24.69■■□□□ 1.54
LAPTM4B-204ENST00000619747 AKAP12Q02952 1782 aa24.67■■□□□ 1.54
LAPTM4B-204ENST00000619747 MVPQ14764 893 aaKnown RBP24.67■■□□□ 1.54
LAPTM4B-204ENST00000619747 NLRP6P59044 892 aa24.66■■□□□ 1.54
LAPTM4B-204ENST00000619747 GLIPR1L2Q4G1C9 344 aa24.66■■□□□ 1.54
LAPTM4B-204ENST00000619747 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
LAPTM4B-204ENST00000619747 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 RGPD8O14715 1765 aaPredicted RBP24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 CT47B1P0C2W7 299 aaPredicted RBP24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 ATF7IPQ6VMQ6 1270 aa24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 MAP3K19Q56UN5 1328 aa24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 PODXL2Q9NZ53 605 aa24.65■■□□□ 1.54
LAPTM4B-204ENST00000619747 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.53
LAPTM4B-204ENST00000619747 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
LAPTM4B-204ENST00000619747 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
LAPTM4B-204ENST00000619747 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
LAPTM4B-204ENST00000619747 MCM10Q7L590 875 aa24.62■■□□□ 1.53
LAPTM4B-204ENST00000619747 RIMS1Q86UR5 1692 aaKnown RBP24.62■■□□□ 1.53
LAPTM4B-204ENST00000619747 AMPHP49418 695 aa24.62■■□□□ 1.53
LAPTM4B-204ENST00000619747 GNAI1P63096 354 aa24.61■■□□□ 1.53
LAPTM4B-204ENST00000619747 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
LAPTM4B-204ENST00000619747 C8orf58Q8NAV2 365 aa24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 DIP2AQ14689 1571 aa24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 VAMP4O75379 141 aa24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 C8orf34Q49A92 452 aa24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 ABTB2Q8N961 1025 aa24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 CEP170BQ9Y4F5 1589 aaPredicted RBP24.6■■□□□ 1.53
LAPTM4B-204ENST00000619747 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
LAPTM4B-204ENST00000619747 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
LAPTM4B-204ENST00000619747 LTV1Q96GA3 475 aaPredicted RBP24.59■■□□□ 1.53
LAPTM4B-204ENST00000619747 FOXO3O43524 673 aa24.59■■□□□ 1.53
LAPTM4B-204ENST00000619747 IFT57Q9NWB7 429 aa24.58■■□□□ 1.52
LAPTM4B-204ENST00000619747 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
LAPTM4B-204ENST00000619747 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
LAPTM4B-204ENST00000619747 CFAP44Q96MT7 982 aa24.57■■□□□ 1.52
LAPTM4B-204ENST00000619747 SSH2Q76I76 1423 aa24.57■■□□□ 1.52
LAPTM4B-204ENST00000619747 MIS18AQ9NYP9 233 aa24.56■■□□□ 1.52
LAPTM4B-204ENST00000619747 TOPAZ1Q8N9V7 1692 aa24.56■■□□□ 1.52
LAPTM4B-204ENST00000619747 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
LAPTM4B-204ENST00000619747 ZBTB7CA1YPR0 619 aa24.56■■□□□ 1.52
LAPTM4B-204ENST00000619747 FAM43AQ8N2R8 423 aa24.56■■□□□ 1.52
LAPTM4B-204ENST00000619747 RWDD1Q9H446 243 aaPredicted RBP24.55■■□□□ 1.52
LAPTM4B-204ENST00000619747 PDZRN3Q9UPQ7 1066 aa24.55■■□□□ 1.52
LAPTM4B-204ENST00000619747 IPO8O15397 1037 aaKnown RBP24.55■■□□□ 1.52
LAPTM4B-204ENST00000619747 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
LAPTM4B-204ENST00000619747 KIF16BQ96L93 1317 aa24.55■■□□□ 1.52
LAPTM4B-204ENST00000619747 ZNF853P0CG23 659 aa24.54■■□□□ 1.52
LAPTM4B-204ENST00000619747 DDX19BQ9UMR2 479 aa24.54■■□□□ 1.52
LAPTM4B-204ENST00000619747 NRKQ7Z2Y5 1582 aa24.54■■□□□ 1.52
LAPTM4B-204ENST00000619747 NFKBIBQ15653 356 aa24.54■■□□□ 1.52
LAPTM4B-204ENST00000619747 USP31Q70CQ4 1352 aa24.53■■□□□ 1.52
LAPTM4B-204ENST00000619747 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
LAPTM4B-204ENST00000619747 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
LAPTM4B-204ENST00000619747 ALDH1L2Q3SY69 923 aa24.53■■□□□ 1.52
LAPTM4B-204ENST00000619747 DLG5Q8TDM6 1919 aa24.52■■□□□ 1.52
LAPTM4B-204ENST00000619747 EYA1Q99502 592 aa24.52■■□□□ 1.52
LAPTM4B-204ENST00000619747 PEAK1Q9H792 1746 aa24.52■■□□□ 1.52
LAPTM4B-204ENST00000619747 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
LAPTM4B-204ENST00000619747 SLC4A3P48751 1232 aa24.5■■□□□ 1.51
LAPTM4B-204ENST00000619747 MRPL50Q8N5N7 158 aaKnown RBP24.5■■□□□ 1.51
LAPTM4B-204ENST00000619747 C1orf115Q9H7X2 142 aa24.5■■□□□ 1.51
LAPTM4B-204ENST00000619747 MTHFSDQ2M296 383 aaKnown RBP24.5■■□□□ 1.51
LAPTM4B-204ENST00000619747 FLT4P35916 1363 aa24.48■■□□□ 1.51
LAPTM4B-204ENST00000619747 AAMPQ13685 434 aa24.48■■□□□ 1.51
LAPTM4B-204ENST00000619747 XRN1Q8IZH2 1706 aaKnown RBP24.48■■□□□ 1.51
LAPTM4B-204ENST00000619747 ZBTB40Q9NUA8 1239 aa24.48■■□□□ 1.51
LAPTM4B-204ENST00000619747 PSME1Q06323 249 aa24.47■■□□□ 1.51
LAPTM4B-204ENST00000619747 LMOD2Q6P5Q4 547 aa24.47■■□□□ 1.51
LAPTM4B-204ENST00000619747 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
LAPTM4B-204ENST00000619747 SEC24BO95487 1268 aa24.47■■□□□ 1.51
LAPTM4B-204ENST00000619747 SBNO1A3KN83 1393 aa24.46■■□□□ 1.51
LAPTM4B-204ENST00000619747 ORAI2Q96SN7 254 aa24.45■■□□□ 1.5
LAPTM4B-204ENST00000619747 PIK3R4Q99570 1358 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms