RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PAK3O75914 559 aaPredicted RBP24.6■■□□□ 1.53
PSPC1-206ENST00000619300 CALD1Q05682 793 aaKnown RBP24.6■■□□□ 1.53
PSPC1-206ENST00000619300 SULT6B1Q6IMI4 303 aa24.6■■□□□ 1.53
PSPC1-206ENST00000619300 PEAK1Q9H792 1746 aa24.6■■□□□ 1.53
PSPC1-206ENST00000619300 ESCO1Q5FWF5 840 aa24.59■■□□□ 1.53
PSPC1-206ENST00000619300 FRAT1Q92837 279 aaPredicted RBP24.59■■□□□ 1.53
PSPC1-206ENST00000619300 FLT4P35916 1363 aa24.59■■□□□ 1.53
PSPC1-206ENST00000619300 LMOD3Q0VAK6 560 aa24.58■■□□□ 1.53
PSPC1-206ENST00000619300 PROSER2Q86WR7 435 aaPredicted RBP24.58■■□□□ 1.53
PSPC1-206ENST00000619300 AEBP1Q8IUX7 1158 aa24.58■■□□□ 1.53
PSPC1-206ENST00000619300 NWD1Q149M9 1564 aa24.58■■□□□ 1.53
PSPC1-206ENST00000619300 AMPHP49418 695 aa24.57■■□□□ 1.52
PSPC1-206ENST00000619300 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
PSPC1-206ENST00000619300 BCL2L13Q9BXK5 485 aa24.56■■□□□ 1.52
PSPC1-206ENST00000619300 PSME1Q06323 249 aa24.56■■□□□ 1.52
PSPC1-206ENST00000619300 PANK1Q8TE04 598 aa24.55■■□□□ 1.52
PSPC1-206ENST00000619300 THUMPD2Q9BTF0 503 aaKnown RBP24.54■■□□□ 1.52
PSPC1-206ENST00000619300 KIF24Q5T7B8 1368 aa24.53■■□□□ 1.52
PSPC1-206ENST00000619300 IFT57Q9NWB7 429 aa24.53■■□□□ 1.52
PSPC1-206ENST00000619300 GNAI1P63096 354 aa24.52■■□□□ 1.52
PSPC1-206ENST00000619300 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
PSPC1-206ENST00000619300 ARHGEF10O15013 1369 aa24.52■■□□□ 1.52
PSPC1-206ENST00000619300 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
PSPC1-206ENST00000619300 COG6Q9Y2V7 657 aa24.52■■□□□ 1.52
PSPC1-206ENST00000619300 ZNF853P0CG23 659 aa24.51■■□□□ 1.51
PSPC1-206ENST00000619300 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
PSPC1-206ENST00000619300 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
PSPC1-206ENST00000619300 ORAI2Q96SN7 254 aa24.51■■□□□ 1.51
PSPC1-206ENST00000619300 C19orf44Q9H6X5 657 aa24.51■■□□□ 1.51
PSPC1-206ENST00000619300 RGPD1P0DJD0 1748 aa24.5■■□□□ 1.51
PSPC1-206ENST00000619300 SSH1Q8WYL5 1049 aa24.5■■□□□ 1.51
PSPC1-206ENST00000619300 SMC4Q9NTJ3 1288 aa24.5■■□□□ 1.51
PSPC1-206ENST00000619300 HOXC9P31274 260 aa24.49■■□□□ 1.51
PSPC1-206ENST00000619300 ZKSCAN2Q63HK3 967 aa24.49■■□□□ 1.51
PSPC1-206ENST00000619300 CFAP44Q96MT7 982 aa24.48■■□□□ 1.51
PSPC1-206ENST00000619300 MARF1Q9Y4F3 1742 aaKnown RBP24.48■■□□□ 1.51
PSPC1-206ENST00000619300 FAM83GA6ND36 823 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
PSPC1-206ENST00000619300 RLBP1P12271 317 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 AAMPQ13685 434 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 ZNF428Q96B54 188 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 EYA1Q99502 592 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 TNNQ9UQP3 1299 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 IGSF1Q8N6C5 1336 aa24.47■■□□□ 1.51
PSPC1-206ENST00000619300 FOXO3O43524 673 aa24.46■■□□□ 1.51
PSPC1-206ENST00000619300 MS4A1P11836 297 aa24.46■■□□□ 1.51
PSPC1-206ENST00000619300 ALDH1L2Q3SY69 923 aa24.46■■□□□ 1.51
PSPC1-206ENST00000619300 KDRP35968 1356 aa24.46■■□□□ 1.51
PSPC1-206ENST00000619300 CLUAP1Q96AJ1 413 aa24.45■■□□□ 1.51
PSPC1-206ENST00000619300 MBIPQ9NS73 344 aa24.45■■□□□ 1.51
PSPC1-206ENST00000619300 DCTN1Q14203 1278 aa24.45■■□□□ 1.5
PSPC1-206ENST00000619300 DLG5Q8TDM6 1919 aa24.43■■□□□ 1.5
PSPC1-206ENST00000619300 DZIP1LQ8IYY4 767 aaKnown RBP24.43■■□□□ 1.5
PSPC1-206ENST00000619300 KCNH5Q8NCM2 988 aa24.43■■□□□ 1.5
PSPC1-206ENST00000619300 VAMP4O75379 141 aa24.42■■□□□ 1.5
PSPC1-206ENST00000619300 HSPA2P54652 639 aa24.42■■□□□ 1.5
PSPC1-206ENST00000619300 NOB1Q9ULX3 412 aaKnown RBP24.42■■□□□ 1.5
PSPC1-206ENST00000619300 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
PSPC1-206ENST00000619300 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
PSPC1-206ENST00000619300 FTSJ3Q8IY81 847 aaKnown RBP24.41■■□□□ 1.5
PSPC1-206ENST00000619300 BRPF1P55201 1214 aaPredicted RBP24.4■■□□□ 1.5
PSPC1-206ENST00000619300 ATF7IPQ6VMQ6 1270 aa24.4■■□□□ 1.5
PSPC1-206ENST00000619300 IP6K1Q92551 441 aa24.4■■□□□ 1.5
PSPC1-206ENST00000619300 TMEM94Q12767 1356 aa24.4■■□□□ 1.5
PSPC1-206ENST00000619300 KIF16BQ96L93 1317 aa24.4■■□□□ 1.5
PSPC1-206ENST00000619300 IPO8O15397 1037 aaKnown RBP24.4■■□□□ 1.5
PSPC1-206ENST00000619300 TRIM27P14373 513 aa24.4■■□□□ 1.5
PSPC1-206ENST00000619300 MVPQ14764 893 aaKnown RBP24.4■■□□□ 1.5
PSPC1-206ENST00000619300 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
PSPC1-206ENST00000619300 ATF3P18847 181 aa24.39■■□□□ 1.5
PSPC1-206ENST00000619300 XPCQ01831 940 aaPredicted RBP24.39■■□□□ 1.5
PSPC1-206ENST00000619300 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.5
PSPC1-206ENST00000619300 KRT28Q7Z3Y7 464 aa24.39■■□□□ 1.49
PSPC1-206ENST00000619300 TSPYL6Q8N831 410 aa24.39■■□□□ 1.49
PSPC1-206ENST00000619300 MCM10Q7L590 875 aa24.38■■□□□ 1.49
PSPC1-206ENST00000619300 NFAT5O94916 1531 aa24.37■■□□□ 1.49
PSPC1-206ENST00000619300 KDM4FA0A1W2PPD8 638 aa24.37■■□□□ 1.49
PSPC1-206ENST00000619300 CHL1O00533 1208 aa24.37■■□□□ 1.49
PSPC1-206ENST00000619300 IGHDP01880 384 aa24.37■■□□□ 1.49
PSPC1-206ENST00000619300 GAS2L2Q8NHY3 880 aa24.37■■□□□ 1.49
PSPC1-206ENST00000619300 LTV1Q96GA3 475 aaPredicted RBP24.37■■□□□ 1.49
PSPC1-206ENST00000619300 C8orf58Q8NAV2 365 aa24.36■■□□□ 1.49
PSPC1-206ENST00000619300 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
PSPC1-206ENST00000619300 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
PSPC1-206ENST00000619300 GCP02774 474 aa24.34■■□□□ 1.49
PSPC1-206ENST00000619300 RTF1Q92541 710 aaKnown RBP24.34■■□□□ 1.49
PSPC1-206ENST00000619300 DCCP43146 1447 aa24.34■■□□□ 1.49
PSPC1-206ENST00000619300 SKAP1Q86WV1 359 aa24.34■■□□□ 1.49
PSPC1-206ENST00000619300 MRPL50Q8N5N7 158 aaKnown RBP24.34■■□□□ 1.49
PSPC1-206ENST00000619300 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
PSPC1-206ENST00000619300 MST1RQ04912 1400 aa24.33■■□□□ 1.48
PSPC1-206ENST00000619300 PCDHB15Q9Y5E8 787 aa24.32■■□□□ 1.48
PSPC1-206ENST00000619300 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
PSPC1-206ENST00000619300 KIF1AQ12756 1690 aa24.32■■□□□ 1.48
PSPC1-206ENST00000619300 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
PSPC1-206ENST00000619300 CRB1P82279 1406 aa24.31■■□□□ 1.48
PSPC1-206ENST00000619300 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
PSPC1-206ENST00000619300 ARHGEF25Q86VW2 580 aa24.31■■□□□ 1.48
PSPC1-206ENST00000619300 ARHGAP45Q92619 1136 aa24.31■■□□□ 1.48
PSPC1-206ENST00000619300 DDX19BQ9UMR2 479 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms