RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
CIITA-213ENST00000618327 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
CIITA-213ENST00000618327 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
CIITA-213ENST00000618327 GNAI2P04899 355 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 PLXNC1O60486 1568 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 MSH6P52701 1360 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 PIK3C2GO75747 1445 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 REC8O95072 547 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 HSPA2P54652 639 aa17.05■□□□□ 0.32
CIITA-213ENST00000618327 PTPRTO14522 1441 aa17.04■□□□□ 0.32
CIITA-213ENST00000618327 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
CIITA-213ENST00000618327 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
CIITA-213ENST00000618327 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
CIITA-213ENST00000618327 ALDH1L2Q3SY69 923 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 SRCIN1Q9C0H9 1055 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
CIITA-213ENST00000618327 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
CIITA-213ENST00000618327 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
CIITA-213ENST00000618327 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
CIITA-213ENST00000618327 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
CIITA-213ENST00000618327 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.32
CIITA-213ENST00000618327 PLA2R1Q13018 1463 aa17.02■□□□□ 0.31
CIITA-213ENST00000618327 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.31
CIITA-213ENST00000618327 LTKP29376 864 aa17.01■□□□□ 0.31
CIITA-213ENST00000618327 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
CIITA-213ENST00000618327 ERC2O15083 957 aa17■□□□□ 0.31
CIITA-213ENST00000618327 MSH5O43196 834 aa17■□□□□ 0.31
CIITA-213ENST00000618327 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
CIITA-213ENST00000618327 MYL6BP14649 208 aa17■□□□□ 0.31
CIITA-213ENST00000618327 IL16Q14005 1332 aa17■□□□□ 0.31
CIITA-213ENST00000618327 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
CIITA-213ENST00000618327 MPRIPQ6WCQ1 1025 aa17■□□□□ 0.31
CIITA-213ENST00000618327 FAM83GA6ND36 823 aa17■□□□□ 0.31
CIITA-213ENST00000618327 SLC4A3P48751 1232 aa16.99■□□□□ 0.31
CIITA-213ENST00000618327 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
CIITA-213ENST00000618327 LRRFIP1Q32MZ4 808 aaKnown RBP16.99■□□□□ 0.31
CIITA-213ENST00000618327 KIF6Q6ZMV9 814 aa16.99■□□□□ 0.31
CIITA-213ENST00000618327 CLASRPQ8N2M8 674 aaKnown RBP16.99■□□□□ 0.31
CIITA-213ENST00000618327 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
CIITA-213ENST00000618327 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
CIITA-213ENST00000618327 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
CIITA-213ENST00000618327 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
CIITA-213ENST00000618327 NRDCO43847 1150 aa16.99■□□□□ 0.31
CIITA-213ENST00000618327 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
CIITA-213ENST00000618327 G3V3G9 751 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 LRRIQ1Q96JM4 1722 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 MYOM2P54296 1465 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 CDC45O75419 566 aa16.97■□□□□ 0.31
CIITA-213ENST00000618327 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 ABCC3O15438 1527 aa16.96■□□□□ 0.31
CIITA-213ENST00000618327 FLT4P35916 1363 aa16.96■□□□□ 0.3
CIITA-213ENST00000618327 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
CIITA-213ENST00000618327 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.3
CIITA-213ENST00000618327 TET3O43151 1660 aa16.95■□□□□ 0.3
CIITA-213ENST00000618327 SIRT1Q96EB6 747 aa16.95■□□□□ 0.3
CIITA-213ENST00000618327 C22orf23Q9BZE7 217 aa16.95■□□□□ 0.3
CIITA-213ENST00000618327 EDC4Q6P2E9 1401 aaKnown RBP16.95■□□□□ 0.3
CIITA-213ENST00000618327 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
CIITA-213ENST00000618327 ADAMTS2O95450 1211 aa16.94■□□□□ 0.3
CIITA-213ENST00000618327 PTMSP20962 102 aa16.94■□□□□ 0.3
CIITA-213ENST00000618327 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
CIITA-213ENST00000618327 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
CIITA-213ENST00000618327 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
CIITA-213ENST00000618327 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
CIITA-213ENST00000618327 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
CIITA-213ENST00000618327 ERVK-7P63135 1459 aa16.94■□□□□ 0.3
CIITA-213ENST00000618327 TRIM27P14373 513 aa16.93■□□□□ 0.3
CIITA-213ENST00000618327 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
CIITA-213ENST00000618327 ERC1Q8IUD2 1116 aa16.93■□□□□ 0.3
CIITA-213ENST00000618327 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
CIITA-213ENST00000618327 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
CIITA-213ENST00000618327 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
CIITA-213ENST00000618327 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CIITA-213ENST00000618327 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
CIITA-213ENST00000618327 KDM5CP41229 1560 aa16.92■□□□□ 0.3
CIITA-213ENST00000618327 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 KIF1BO60333 1816 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 UNC13BO14795 1591 aa16.91■□□□□ 0.3
CIITA-213ENST00000618327 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
CIITA-213ENST00000618327 GCP02774 474 aa16.9■□□□□ 0.3
CIITA-213ENST00000618327 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
CIITA-213ENST00000618327 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
CIITA-213ENST00000618327 METP08581 1390 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms