RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 PLEKHG3A1L390 1219 aa17.85■□□□□ 0.45
CBWD1-226ENST00000618061 DCTN1Q14203 1278 aa17.85■□□□□ 0.45
CBWD1-226ENST00000618061 C8orf34Q49A92 452 aa17.85■□□□□ 0.45
CBWD1-226ENST00000618061 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
CBWD1-226ENST00000618061 USP6P35125 1406 aa17.85■□□□□ 0.45
CBWD1-226ENST00000618061 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
CBWD1-226ENST00000618061 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
CBWD1-226ENST00000618061 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
CBWD1-226ENST00000618061 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
CBWD1-226ENST00000618061 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
CBWD1-226ENST00000618061 KCNA6P17658 529 aa17.83■□□□□ 0.45
CBWD1-226ENST00000618061 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.45
CBWD1-226ENST00000618061 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.44
CBWD1-226ENST00000618061 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
CBWD1-226ENST00000618061 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
CBWD1-226ENST00000618061 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
CBWD1-226ENST00000618061 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
CBWD1-226ENST00000618061 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
CBWD1-226ENST00000618061 MYT1Q01538 1121 aa17.8■□□□□ 0.44
CBWD1-226ENST00000618061 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
CBWD1-226ENST00000618061 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
CBWD1-226ENST00000618061 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
CBWD1-226ENST00000618061 RIMS1Q86UR5 1692 aaKnown RBP17.8■□□□□ 0.44
CBWD1-226ENST00000618061 NBR1Q14596 966 aa17.79■□□□□ 0.44
CBWD1-226ENST00000618061 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
CBWD1-226ENST00000618061 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
CBWD1-226ENST00000618061 SSH2Q76I76 1423 aa17.77■□□□□ 0.44
CBWD1-226ENST00000618061 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.43
CBWD1-226ENST00000618061 VAMP4O75379 141 aa17.76■□□□□ 0.43
CBWD1-226ENST00000618061 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
CBWD1-226ENST00000618061 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
CBWD1-226ENST00000618061 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
CBWD1-226ENST00000618061 XRN1Q8IZH2 1706 aaKnown RBP17.76■□□□□ 0.43
CBWD1-226ENST00000618061 GNAI1P63096 354 aa17.75■□□□□ 0.43
CBWD1-226ENST00000618061 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
CBWD1-226ENST00000618061 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
CBWD1-226ENST00000618061 MCM10Q7L590 875 aa17.74■□□□□ 0.43
CBWD1-226ENST00000618061 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
CBWD1-226ENST00000618061 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
CBWD1-226ENST00000618061 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 SEC24BO95487 1268 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
CBWD1-226ENST00000618061 AAMPQ13685 434 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
CBWD1-226ENST00000618061 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
CBWD1-226ENST00000618061 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
CBWD1-226ENST00000618061 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
CBWD1-226ENST00000618061 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
CBWD1-226ENST00000618061 FOXO3O43524 673 aa17.72■□□□□ 0.43
CBWD1-226ENST00000618061 NLRP6P59044 892 aa17.72■□□□□ 0.43
CBWD1-226ENST00000618061 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.43
CBWD1-226ENST00000618061 LMOD3Q0VAK6 560 aa17.71■□□□□ 0.43
CBWD1-226ENST00000618061 AMPHP49418 695 aa17.7■□□□□ 0.42
CBWD1-226ENST00000618061 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
CBWD1-226ENST00000618061 ZBTB40Q9NUA8 1239 aa17.7■□□□□ 0.42
CBWD1-226ENST00000618061 MIS18AQ9NYP9 233 aa17.69■□□□□ 0.42
CBWD1-226ENST00000618061 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
CBWD1-226ENST00000618061 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
CBWD1-226ENST00000618061 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
CBWD1-226ENST00000618061 C1orf115Q9H7X2 142 aa17.69■□□□□ 0.42
CBWD1-226ENST00000618061 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
CBWD1-226ENST00000618061 ABTB2Q8N961 1025 aa17.67■□□□□ 0.42
CBWD1-226ENST00000618061 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
CBWD1-226ENST00000618061 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
CBWD1-226ENST00000618061 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-226ENST00000618061 EYA1Q99502 592 aa17.66■□□□□ 0.42
CBWD1-226ENST00000618061 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
CBWD1-226ENST00000618061 FLT4P35916 1363 aa17.66■□□□□ 0.42
CBWD1-226ENST00000618061 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
CBWD1-226ENST00000618061 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.42
CBWD1-226ENST00000618061 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.42
CBWD1-226ENST00000618061 ZNF428Q96B54 188 aa17.64■□□□□ 0.42
CBWD1-226ENST00000618061 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
CBWD1-226ENST00000618061 USP19O94966 1318 aa17.64■□□□□ 0.41
CBWD1-226ENST00000618061 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
CBWD1-226ENST00000618061 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
CBWD1-226ENST00000618061 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
CBWD1-226ENST00000618061 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
CBWD1-226ENST00000618061 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
CBWD1-226ENST00000618061 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
CBWD1-226ENST00000618061 CHL1O00533 1208 aa17.62■□□□□ 0.41
CBWD1-226ENST00000618061 HOXC9P31274 260 aa17.62■□□□□ 0.41
CBWD1-226ENST00000618061 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
CBWD1-226ENST00000618061 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
CBWD1-226ENST00000618061 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
CBWD1-226ENST00000618061 SETD1BQ9UPS6 1966 aaKnown RBP17.6■□□□□ 0.41
CBWD1-226ENST00000618061 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
CBWD1-226ENST00000618061 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
CBWD1-226ENST00000618061 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
CBWD1-226ENST00000618061 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CBWD1-226ENST00000618061 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms