RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 G2E3Q7L622 706 aa18.3■□□□□ 0.52
TNFRSF11A-206ENST00000617039 MPNDQ8N594 471 aa18.3■□□□□ 0.52
TNFRSF11A-206ENST00000617039 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
TNFRSF11A-206ENST00000617039 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF11A-206ENST00000617039 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
TNFRSF11A-206ENST00000617039 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
TNFRSF11A-206ENST00000617039 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
TNFRSF11A-206ENST00000617039 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
TNFRSF11A-206ENST00000617039 METP08581 1390 aa18.28■□□□□ 0.52
TNFRSF11A-206ENST00000617039 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF11A-206ENST00000617039 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
TNFRSF11A-206ENST00000617039 ZCCHC11Q5TAX3 1644 aaKnown RBP18.27■□□□□ 0.52
TNFRSF11A-206ENST00000617039 PPFIA3O75145 1194 aa18.27■□□□□ 0.51
TNFRSF11A-206ENST00000617039 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
TNFRSF11A-206ENST00000617039 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
TNFRSF11A-206ENST00000617039 TNRQ92752 1358 aa18.26■□□□□ 0.51
TNFRSF11A-206ENST00000617039 EYA1Q99502 592 aa18.26■□□□□ 0.51
TNFRSF11A-206ENST00000617039 VAMP4O75379 141 aa18.26■□□□□ 0.51
TNFRSF11A-206ENST00000617039 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
TNFRSF11A-206ENST00000617039 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
TNFRSF11A-206ENST00000617039 TAF7Q15545 349 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF11A-206ENST00000617039 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
TNFRSF11A-206ENST00000617039 NEUROD6Q96NK8 337 aa18.25■□□□□ 0.51
TNFRSF11A-206ENST00000617039 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 BTBD11A6QL63 1104 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 MYO5CQ9NQX4 1742 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 NEK4P51957 841 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
TNFRSF11A-206ENST00000617039 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
TNFRSF11A-206ENST00000617039 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
TNFRSF11A-206ENST00000617039 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
TNFRSF11A-206ENST00000617039 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
TNFRSF11A-206ENST00000617039 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 LRRFIP2Q9Y608 721 aaKnown RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 NUTM2BA6NNL0 878 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 NUTM2EB1AL46 878 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 NUTM2AQ8IVF1 878 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
TNFRSF11A-206ENST00000617039 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
TNFRSF11A-206ENST00000617039 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
TNFRSF11A-206ENST00000617039 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
TNFRSF11A-206ENST00000617039 ABCC1P33527 1531 aa18.21■□□□□ 0.5
TNFRSF11A-206ENST00000617039 STK11IPQ8N1F8 1099 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 MCCP23508 829 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 ARHGEF5Q12774 1597 aa18.2■□□□□ 0.5
TNFRSF11A-206ENST00000617039 GNAI2P04899 355 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
TNFRSF11A-206ENST00000617039 IL13P35225 146 aa18.18■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
TNFRSF11A-206ENST00000617039 FLIIQ13045 1269 aa18.18■□□□□ 0.5
TNFRSF11A-206ENST00000617039 DIAPH3Q9NSV4 1193 aa18.17■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PRR36Q9H6K5 1346 aa18.17■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CWC27Q6UX04 472 aaKnown RBP18.17■□□□□ 0.5
TNFRSF11A-206ENST00000617039 KCNQ3O43525 872 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CDC45O75419 566 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 RNF214Q8ND24 703 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 DNAJC2Q99543 621 aaKnown RBP18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 SETD1BQ9UPS6 1966 aaKnown RBP18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 GOLGA6L3A6NEY3 463 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
TNFRSF11A-206ENST00000617039 TULP1O00294 542 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 GBP4Q96PP9 640 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 ST18O60284 1047 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 CHPF2Q9P2E5 772 aa18.15■□□□□ 0.5
TNFRSF11A-206ENST00000617039 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
TNFRSF11A-206ENST00000617039 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
TNFRSF11A-206ENST00000617039 TOMM22Q9NS69 142 aa18.14■□□□□ 0.49
TNFRSF11A-206ENST00000617039 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
TNFRSF11A-206ENST00000617039 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
TNFRSF11A-206ENST00000617039 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
TNFRSF11A-206ENST00000617039 ZBTB40Q9NUA8 1239 aa18.13■□□□□ 0.49
TNFRSF11A-206ENST00000617039 ZNF521Q96K83 1311 aa18.13■□□□□ 0.49
TNFRSF11A-206ENST00000617039 INTS3Q68E01 1043 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms