RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 AKAP12Q02952 1782 aa27.95■■■□□ 2.06
CLN5-203ENST00000616833 TMEM57Q8N5G2 664 aa27.94■■■□□ 2.06
CLN5-203ENST00000616833 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
CLN5-203ENST00000616833 IL16Q14005 1332 aa27.93■■■□□ 2.06
CLN5-203ENST00000616833 EIF4A2Q14240 407 aaKnown RBP27.93■■■□□ 2.06
CLN5-203ENST00000616833 ATF7IPQ6VMQ6 1270 aa27.93■■■□□ 2.06
CLN5-203ENST00000616833 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
CLN5-203ENST00000616833 CDK12Q9NYV4 1490 aaPredicted RBP27.93■■■□□ 2.06
CLN5-203ENST00000616833 PDZRN3Q9UPQ7 1066 aa27.92■■■□□ 2.06
CLN5-203ENST00000616833 NGDNQ8NEJ9 315 aaKnown RBP27.91■■■□□ 2.06
CLN5-203ENST00000616833 AATKQ6ZMQ8 1374 aa27.91■■■□□ 2.06
CLN5-203ENST00000616833 MBIPQ9NS73 344 aa27.9■■■□□ 2.06
CLN5-203ENST00000616833 THEMISQ8N1K5 641 aaPredicted RBP27.9■■■□□ 2.06
CLN5-203ENST00000616833 SEC24BO95487 1268 aa27.89■■■□□ 2.06
CLN5-203ENST00000616833 KCNA6P17658 529 aa27.89■■■□□ 2.06
CLN5-203ENST00000616833 CT47B1P0C2W7 299 aaPredicted RBP27.88■■■□□ 2.05
CLN5-203ENST00000616833 USP6P35125 1406 aa27.88■■■□□ 2.05
CLN5-203ENST00000616833 RGPD8O14715 1765 aaPredicted RBP27.87■■■□□ 2.05
CLN5-203ENST00000616833 PLEKHG3A1L390 1219 aa27.87■■■□□ 2.05
CLN5-203ENST00000616833 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
CLN5-203ENST00000616833 KRT24Q2M2I5 525 aa27.85■■■□□ 2.05
CLN5-203ENST00000616833 C8orf58Q8NAV2 365 aa27.85■■■□□ 2.05
CLN5-203ENST00000616833 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
CLN5-203ENST00000616833 MCM10Q7L590 875 aa27.85■■■□□ 2.05
CLN5-203ENST00000616833 VAMP4O75379 141 aa27.84■■■□□ 2.05
CLN5-203ENST00000616833 PLEKHG5O94827 1062 aa27.84■■■□□ 2.05
CLN5-203ENST00000616833 DLG5Q8TDM6 1919 aa27.84■■■□□ 2.05
CLN5-203ENST00000616833 C1orf115Q9H7X2 142 aa27.82■■■□□ 2.04
CLN5-203ENST00000616833 OVOS2A0A0J9YW53 1432 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 OVOS2Q6IE36 1432 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 ARHGAP23Q9P227 1491 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 GNAI1P63096 354 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 DDX19BQ9UMR2 479 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
CLN5-203ENST00000616833 SLIT1O75093 1534 aa27.8■■■□□ 2.04
CLN5-203ENST00000616833 MAP3K19Q56UN5 1328 aa27.8■■■□□ 2.04
CLN5-203ENST00000616833 FOXO3O43524 673 aa27.8■■■□□ 2.04
CLN5-203ENST00000616833 TWISTNBQ3B726 338 aaPredicted RBP27.8■■■□□ 2.04
CLN5-203ENST00000616833 C14orf37Q86TY3 774 aa27.8■■■□□ 2.04
CLN5-203ENST00000616833 NRKQ7Z2Y5 1582 aa27.8■■■□□ 2.04
CLN5-203ENST00000616833 BCL11AQ9H165 835 aa27.79■■■□□ 2.04
CLN5-203ENST00000616833 IFT57Q9NWB7 429 aa27.79■■■□□ 2.04
CLN5-203ENST00000616833 PEAK1Q9H792 1746 aa27.79■■■□□ 2.04
CLN5-203ENST00000616833 KIF16BQ96L93 1317 aa27.79■■■□□ 2.04
CLN5-203ENST00000616833 MIS18AQ9NYP9 233 aa27.79■■■□□ 2.04
CLN5-203ENST00000616833 IPO8O15397 1037 aaKnown RBP27.77■■■□□ 2.04
CLN5-203ENST00000616833 MRPL50Q8N5N7 158 aaKnown RBP27.77■■■□□ 2.04
CLN5-203ENST00000616833 DIP2AQ14689 1571 aa27.77■■■□□ 2.04
CLN5-203ENST00000616833 ZNF853P0CG23 659 aa27.77■■■□□ 2.04
CLN5-203ENST00000616833 NLRP6P59044 892 aa27.76■■■□□ 2.03
CLN5-203ENST00000616833 ALDH1L2Q3SY69 923 aa27.76■■■□□ 2.03
CLN5-203ENST00000616833 CFAP44Q96MT7 982 aa27.76■■■□□ 2.03
CLN5-203ENST00000616833 LTV1Q96GA3 475 aaPredicted RBP27.75■■■□□ 2.03
CLN5-203ENST00000616833 AMPHP49418 695 aa27.74■■■□□ 2.03
CLN5-203ENST00000616833 CALD1Q05682 793 aaKnown RBP27.74■■■□□ 2.03
CLN5-203ENST00000616833 ZBTB40Q9NUA8 1239 aa27.74■■■□□ 2.03
CLN5-203ENST00000616833 AAMPQ13685 434 aa27.72■■■□□ 2.03
CLN5-203ENST00000616833 DDRGK1Q96HY6 314 aa27.72■■■□□ 2.03
CLN5-203ENST00000616833 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
CLN5-203ENST00000616833 LMOD3Q0VAK6 560 aa27.72■■■□□ 2.03
CLN5-203ENST00000616833 SSH2Q76I76 1423 aa27.71■■■□□ 2.03
CLN5-203ENST00000616833 USP19O94966 1318 aa27.71■■■□□ 2.03
CLN5-203ENST00000616833 ZBTB7CA1YPR0 619 aa27.7■■■□□ 2.02
CLN5-203ENST00000616833 DAXXQ9UER7 740 aaPredicted RBP27.7■■■□□ 2.02
CLN5-203ENST00000616833 PTCH1Q13635 1447 aa27.7■■■□□ 2.02
CLN5-203ENST00000616833 ABTB2Q8N961 1025 aa27.68■■■□□ 2.02
CLN5-203ENST00000616833 USP31Q70CQ4 1352 aa27.67■■■□□ 2.02
CLN5-203ENST00000616833 MTHFSDQ2M296 383 aaKnown RBP27.67■■■□□ 2.02
CLN5-203ENST00000616833 EYA1Q99502 592 aa27.67■■■□□ 2.02
CLN5-203ENST00000616833 LNPKQ9C0E8 428 aa27.66■■■□□ 2.02
CLN5-203ENST00000616833 CEP170BQ9Y4F5 1589 aaPredicted RBP27.65■■■□□ 2.02
CLN5-203ENST00000616833 TTC21AQ8NDW8 1320 aa27.65■■■□□ 2.02
CLN5-203ENST00000616833 HDAC1Q13547 482 aaPredicted RBP27.65■■■□□ 2.02
CLN5-203ENST00000616833 ZBTB7BO15156 539 aaPredicted RBP27.64■■■□□ 2.02
CLN5-203ENST00000616833 USHBP1Q8N6Y0 703 aa27.64■■■□□ 2.02
CLN5-203ENST00000616833 NALCNQ8IZF0 1738 aa27.63■■■□□ 2.01
CLN5-203ENST00000616833 PIK3C2AO00443 1686 aa27.63■■■□□ 2.01
CLN5-203ENST00000616833 XPCQ01831 940 aaPredicted RBP27.62■■■□□ 2.01
CLN5-203ENST00000616833 RTL5Q5HYW3 569 aaPredicted RBP27.62■■■□□ 2.01
CLN5-203ENST00000616833 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
CLN5-203ENST00000616833 XRN1Q8IZH2 1706 aaKnown RBP27.61■■■□□ 2.01
CLN5-203ENST00000616833 VIRMAQ69YN4 1812 aaKnown RBP27.61■■■□□ 2.01
CLN5-203ENST00000616833 FLT4P35916 1363 aa27.61■■■□□ 2.01
CLN5-203ENST00000616833 SBNO1A3KN83 1393 aa27.59■■■□□ 2.01
CLN5-203ENST00000616833 ZNF428Q96B54 188 aa27.59■■■□□ 2.01
CLN5-203ENST00000616833 SMC5Q8IY18 1101 aa27.59■■■□□ 2.01
CLN5-203ENST00000616833 CHL1O00533 1208 aa27.58■■■□□ 2.01
CLN5-203ENST00000616833 DEKP35659 375 aaKnown RBP27.58■■■□□ 2.01
CLN5-203ENST00000616833 ESCO1Q5FWF5 840 aa27.58■■■□□ 2
CLN5-203ENST00000616833 SETD1BQ9UPS6 1966 aaKnown RBP27.57■■■□□ 2
CLN5-203ENST00000616833 BRPF1P55201 1214 aaPredicted RBP27.57■■■□□ 2
CLN5-203ENST00000616833 ANKRD45Q5TZF3 282 aa27.57■■■□□ 2
CLN5-203ENST00000616833 NECTIN2Q92692 538 aa27.57■■■□□ 2
CLN5-203ENST00000616833 HOXC9P31274 260 aa27.57■■■□□ 2
CLN5-203ENST00000616833 SIRT2Q8IXJ6 389 aa27.57■■■□□ 2
CLN5-203ENST00000616833 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
CLN5-203ENST00000616833 PHF8Q9UPP1 1060 aa27.57■■■□□ 2
CLN5-203ENST00000616833 ABCC4O15439 1325 aa27.56■■■□□ 2
CLN5-203ENST00000616833 MFAP1P55081 439 aaKnown RBP27.56■■■□□ 2
CLN5-203ENST00000616833 RGPD1P0DJD0 1748 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms