RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 STK31Q9BXU1 1019 aa17■□□□□ 0.31
HPS1-215ENST00000613394 HMMRO75330 724 aa16.99■□□□□ 0.31
HPS1-215ENST00000613394 IL16Q14005 1332 aa16.99■□□□□ 0.31
HPS1-215ENST00000613394 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
HPS1-215ENST00000613394 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
HPS1-215ENST00000613394 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
HPS1-215ENST00000613394 AMPHP49418 695 aa16.98■□□□□ 0.31
HPS1-215ENST00000613394 NEK4P51957 841 aa16.98■□□□□ 0.31
HPS1-215ENST00000613394 MPNDQ8N594 471 aa16.98■□□□□ 0.31
HPS1-215ENST00000613394 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
HPS1-215ENST00000613394 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
HPS1-215ENST00000613394 EXOC6BQ9Y2D4 811 aa16.98■□□□□ 0.31
HPS1-215ENST00000613394 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
HPS1-215ENST00000613394 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
HPS1-215ENST00000613394 DNTTIP2Q5QJE6 756 aaKnown RBP16.97■□□□□ 0.31
HPS1-215ENST00000613394 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
HPS1-215ENST00000613394 IFT57Q9NWB7 429 aa16.97■□□□□ 0.31
HPS1-215ENST00000613394 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
HPS1-215ENST00000613394 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
HPS1-215ENST00000613394 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
HPS1-215ENST00000613394 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
HPS1-215ENST00000613394 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
HPS1-215ENST00000613394 MYOM2P54296 1465 aa16.96■□□□□ 0.3
HPS1-215ENST00000613394 REC8O95072 547 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 RABEP1Q15276 862 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 PTMSP20962 102 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
HPS1-215ENST00000613394 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 MEIS3Q99687 375 aa16.95■□□□□ 0.3
HPS1-215ENST00000613394 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
HPS1-215ENST00000613394 MCCP23508 829 aa16.94■□□□□ 0.3
HPS1-215ENST00000613394 TET3O43151 1660 aa16.94■□□□□ 0.3
HPS1-215ENST00000613394 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
HPS1-215ENST00000613394 NUCB2P80303 420 aa16.94■□□□□ 0.3
HPS1-215ENST00000613394 GAS2L3Q86XJ1 694 aa16.94■□□□□ 0.3
HPS1-215ENST00000613394 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
HPS1-215ENST00000613394 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
HPS1-215ENST00000613394 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
HPS1-215ENST00000613394 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
HPS1-215ENST00000613394 CHAMP1Q96JM3 812 aa16.93■□□□□ 0.3
HPS1-215ENST00000613394 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
HPS1-215ENST00000613394 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
HPS1-215ENST00000613394 SNX21Q969T3 373 aa16.92■□□□□ 0.3
HPS1-215ENST00000613394 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
HPS1-215ENST00000613394 KIF1BO60333 1816 aa16.92■□□□□ 0.3
HPS1-215ENST00000613394 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
HPS1-215ENST00000613394 SDSP20132 328 aa16.91■□□□□ 0.3
HPS1-215ENST00000613394 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
HPS1-215ENST00000613394 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
HPS1-215ENST00000613394 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
HPS1-215ENST00000613394 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
HPS1-215ENST00000613394 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
HPS1-215ENST00000613394 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
HPS1-215ENST00000613394 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
HPS1-215ENST00000613394 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
HPS1-215ENST00000613394 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
HPS1-215ENST00000613394 TTC22Q5TAA0 569 aa16.9■□□□□ 0.3
HPS1-215ENST00000613394 FOXO3O43524 673 aa16.89■□□□□ 0.29
HPS1-215ENST00000613394 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
HPS1-215ENST00000613394 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
HPS1-215ENST00000613394 KCNJ4P48050 445 aa16.88■□□□□ 0.29
HPS1-215ENST00000613394 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
HPS1-215ENST00000613394 PKP1Q13835 747 aa16.88■□□□□ 0.29
HPS1-215ENST00000613394 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
HPS1-215ENST00000613394 ERC2O15083 957 aa16.88■□□□□ 0.29
HPS1-215ENST00000613394 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
HPS1-215ENST00000613394 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
HPS1-215ENST00000613394 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 IL13P35225 146 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 R3HCC1Q9Y3T6 440 aaKnown RBP16.87■□□□□ 0.29
HPS1-215ENST00000613394 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 CLCN1P35523 988 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 RBM10P98175 930 aaKnown RBP16.87■□□□□ 0.29
HPS1-215ENST00000613394 RPAP2Q8IXW5 612 aaPredicted RBP16.87■□□□□ 0.29
HPS1-215ENST00000613394 CEP152O94986 1710 aa16.87■□□□□ 0.29
HPS1-215ENST00000613394 SYCE3A1L190 88 aa16.86■□□□□ 0.29
HPS1-215ENST00000613394 GDPD2Q9HCC8 539 aa16.86■□□□□ 0.29
HPS1-215ENST00000613394 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
HPS1-215ENST00000613394 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 DCTPP1Q9H773 170 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 FAM13BQ9NYF5 915 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 DTNBO60941 627 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 MYOM1P52179 1685 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 G2E3Q7L622 706 aa16.85■□□□□ 0.29
HPS1-215ENST00000613394 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
HPS1-215ENST00000613394 GNAI2P04899 355 aa16.84■□□□□ 0.29
HPS1-215ENST00000613394 CCDC173Q0VFZ6 552 aa16.84■□□□□ 0.29
HPS1-215ENST00000613394 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
HPS1-215ENST00000613394 ANKRD44Q8N8A2 993 aa16.84■□□□□ 0.29
HPS1-215ENST00000613394 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
HPS1-215ENST00000613394 CEP85Q6P2H3 762 aa16.83■□□□□ 0.29
HPS1-215ENST00000613394 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
HPS1-215ENST00000613394 NLRP6P59044 892 aa16.83■□□□□ 0.28
HPS1-215ENST00000613394 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
HPS1-215ENST00000613394 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
HPS1-215ENST00000613394 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
HPS1-215ENST00000613394 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
HPS1-215ENST00000613394 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms