RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 TSPYL6Q8N831 410 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 TECPR2O15040 1411 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 VAMP4O75379 141 aa20.21■□□□□ 0.83
TRIM46-211ENST00000611379 NFKBIBQ15653 356 aa20.21■□□□□ 0.83
TRIM46-211ENST00000611379 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
TRIM46-211ENST00000611379 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
TRIM46-211ENST00000611379 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
TRIM46-211ENST00000611379 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
TRIM46-211ENST00000611379 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
TRIM46-211ENST00000611379 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
TRIM46-211ENST00000611379 ACEP12821 1306 aa20.18■□□□□ 0.82
TRIM46-211ENST00000611379 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
TRIM46-211ENST00000611379 SOX12O15370 315 aa20.18■□□□□ 0.82
TRIM46-211ENST00000611379 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
TRIM46-211ENST00000611379 BECN1Q14457 450 aa20.17■□□□□ 0.82
TRIM46-211ENST00000611379 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
TRIM46-211ENST00000611379 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
TRIM46-211ENST00000611379 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
TRIM46-211ENST00000611379 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
TRIM46-211ENST00000611379 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
TRIM46-211ENST00000611379 EID1Q9Y6B2 187 aa20.16■□□□□ 0.82
TRIM46-211ENST00000611379 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
TRIM46-211ENST00000611379 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
TRIM46-211ENST00000611379 CFAP44Q96MT7 982 aa20.16■□□□□ 0.82
TRIM46-211ENST00000611379 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
TRIM46-211ENST00000611379 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
TRIM46-211ENST00000611379 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
TRIM46-211ENST00000611379 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
TRIM46-211ENST00000611379 TBC1D32Q96NH3 1257 aa20.13■□□□□ 0.81
TRIM46-211ENST00000611379 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
TRIM46-211ENST00000611379 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
TRIM46-211ENST00000611379 PLEKHG3A1L390 1219 aa20.12■□□□□ 0.81
TRIM46-211ENST00000611379 LNPKQ9C0E8 428 aa20.12■□□□□ 0.81
TRIM46-211ENST00000611379 C1orf115Q9H7X2 142 aa20.12■□□□□ 0.81
TRIM46-211ENST00000611379 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
TRIM46-211ENST00000611379 AMOTL2Q9Y2J4 779 aa20.12■□□□□ 0.81
TRIM46-211ENST00000611379 HSP90AB2PQ58FF8 381 aa20.11■□□□□ 0.81
TRIM46-211ENST00000611379 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
TRIM46-211ENST00000611379 CHMP4BQ9H444 224 aaKnown RBP20.11■□□□□ 0.81
TRIM46-211ENST00000611379 MFAP1P55081 439 aaKnown RBP20.11■□□□□ 0.81
TRIM46-211ENST00000611379 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
TRIM46-211ENST00000611379 VIRMAQ69YN4 1812 aaKnown RBP20.1■□□□□ 0.81
TRIM46-211ENST00000611379 NUCB1Q02818 461 aa20.09■□□□□ 0.81
TRIM46-211ENST00000611379 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
TRIM46-211ENST00000611379 MON2Q7Z3U7 1717 aa20.09■□□□□ 0.81
TRIM46-211ENST00000611379 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
TRIM46-211ENST00000611379 CHD1LQ86WJ1 897 aa20.08■□□□□ 0.81
TRIM46-211ENST00000611379 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
TRIM46-211ENST00000611379 MCM10Q7L590 875 aa20.07■□□□□ 0.8
TRIM46-211ENST00000611379 NGDNQ8NEJ9 315 aaKnown RBP20.07■□□□□ 0.8
TRIM46-211ENST00000611379 C3P01024 1663 aa20.07■□□□□ 0.8
TRIM46-211ENST00000611379 USP6P35125 1406 aa20.07■□□□□ 0.8
TRIM46-211ENST00000611379 API5Q9BZZ5 524 aaKnown RBP20.06■□□□□ 0.8
TRIM46-211ENST00000611379 PTPRUQ92729 1446 aa20.06■□□□□ 0.8
TRIM46-211ENST00000611379 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
TRIM46-211ENST00000611379 ITSN1Q15811 1721 aa20.06■□□□□ 0.8
TRIM46-211ENST00000611379 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.06■□□□□ 0.8
TRIM46-211ENST00000611379 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
TRIM46-211ENST00000611379 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
TRIM46-211ENST00000611379 TBC1D2Q9BYX2 928 aa20.05■□□□□ 0.8
TRIM46-211ENST00000611379 AKAP12Q02952 1782 aa20.05■□□□□ 0.8
TRIM46-211ENST00000611379 ABCC4O15439 1325 aa20.05■□□□□ 0.8
TRIM46-211ENST00000611379 OVOS2A0A0J9YW53 1432 aa20.04■□□□□ 0.8
TRIM46-211ENST00000611379 OVOS2Q6IE36 1432 aa20.04■□□□□ 0.8
TRIM46-211ENST00000611379 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
TRIM46-211ENST00000611379 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
TRIM46-211ENST00000611379 GSE1Q14687 1217 aa20.03■□□□□ 0.8
TRIM46-211ENST00000611379 GCC1Q96CN9 775 aa20.03■□□□□ 0.8
TRIM46-211ENST00000611379 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
TRIM46-211ENST00000611379 THEMISQ8N1K5 641 aaPredicted RBP20.02■□□□□ 0.8
TRIM46-211ENST00000611379 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.79
TRIM46-211ENST00000611379 CHL1O00533 1208 aa20.01■□□□□ 0.79
TRIM46-211ENST00000611379 SIRT2Q8IXJ6 389 aa20.01■□□□□ 0.79
TRIM46-211ENST00000611379 SPRYD3Q8NCJ5 442 aa20.01■□□□□ 0.79
TRIM46-211ENST00000611379 AMPHP49418 695 aa20■□□□□ 0.79
TRIM46-211ENST00000611379 HAP1P54257 671 aaPredicted RBP20■□□□□ 0.79
TRIM46-211ENST00000611379 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
TRIM46-211ENST00000611379 DLG5Q8TDM6 1919 aa19.99■□□□□ 0.79
TRIM46-211ENST00000611379 MIS18AQ9NYP9 233 aa19.99■□□□□ 0.79
TRIM46-211ENST00000611379 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
TRIM46-211ENST00000611379 FOXO3O43524 673 aa19.99■□□□□ 0.79
TRIM46-211ENST00000611379 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
TRIM46-211ENST00000611379 NLRP6P59044 892 aa19.96■□□□□ 0.79
TRIM46-211ENST00000611379 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
TRIM46-211ENST00000611379 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
TRIM46-211ENST00000611379 NUTM2GQ5VZR2 741 aa19.96■□□□□ 0.79
TRIM46-211ENST00000611379 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
TRIM46-211ENST00000611379 ANTXR1Q9H6X2 564 aa19.95■□□□□ 0.78
TRIM46-211ENST00000611379 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
TRIM46-211ENST00000611379 INTS3Q68E01 1043 aaKnown RBP19.94■□□□□ 0.78
TRIM46-211ENST00000611379 FLT4P35916 1363 aa19.94■□□□□ 0.78
TRIM46-211ENST00000611379 KCNA6P17658 529 aa19.94■□□□□ 0.78
TRIM46-211ENST00000611379 EYA1Q99502 592 aa19.94■□□□□ 0.78
TRIM46-211ENST00000611379 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
TRIM46-211ENST00000611379 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
TRIM46-211ENST00000611379 TOPAZ1Q8N9V7 1692 aa19.93■□□□□ 0.78
TRIM46-211ENST00000611379 SBNO1A3KN83 1393 aa19.93■□□□□ 0.78
TRIM46-211ENST00000611379 ARHGAP23Q9P227 1491 aa19.92■□□□□ 0.78
TRIM46-211ENST00000611379 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms