RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
TP53-219ENST00000610538 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
TP53-219ENST00000610538 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
TP53-219ENST00000610538 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
TP53-219ENST00000610538 NEFMP07197 916 aa16.1■□□□□ 0.17
TP53-219ENST00000610538 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
TP53-219ENST00000610538 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
TP53-219ENST00000610538 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
TP53-219ENST00000610538 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
TP53-219ENST00000610538 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
TP53-219ENST00000610538 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
TP53-219ENST00000610538 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.17
TP53-219ENST00000610538 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.17
TP53-219ENST00000610538 NGEFQ8N5V2 710 aa16.08■□□□□ 0.17
TP53-219ENST00000610538 TSR2Q969E8 191 aaKnown RBP16.08■□□□□ 0.17
TP53-219ENST00000610538 NWD1Q149M9 1564 aa16.08■□□□□ 0.16
TP53-219ENST00000610538 PNNQ9H307 717 aaKnown RBP16.08■□□□□ 0.16
TP53-219ENST00000610538 IQSEC2Q5JU85 1478 aa16.08■□□□□ 0.16
TP53-219ENST00000610538 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
TP53-219ENST00000610538 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
TP53-219ENST00000610538 BCAR3O75815 825 aa16.07■□□□□ 0.16
TP53-219ENST00000610538 ARXQ96QS3 562 aa16.07■□□□□ 0.16
TP53-219ENST00000610538 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
TP53-219ENST00000610538 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
TP53-219ENST00000610538 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
TP53-219ENST00000610538 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
TP53-219ENST00000610538 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
TP53-219ENST00000610538 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
TP53-219ENST00000610538 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
TP53-219ENST00000610538 HOXC9P31274 260 aa16.05■□□□□ 0.16
TP53-219ENST00000610538 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
TP53-219ENST00000610538 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
TP53-219ENST00000610538 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
TP53-219ENST00000610538 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
TP53-219ENST00000610538 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
TP53-219ENST00000610538 MSH6P52701 1360 aa16.04■□□□□ 0.16
TP53-219ENST00000610538 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 FLT4P35916 1363 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 GCP02774 474 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 EYA1Q99502 592 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
TP53-219ENST00000610538 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.16
TP53-219ENST00000610538 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
TP53-219ENST00000610538 MST1RQ04912 1400 aa16.02■□□□□ 0.15
TP53-219ENST00000610538 ZC3H6P61129 1189 aaKnown RBP16.01■□□□□ 0.15
TP53-219ENST00000610538 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
TP53-219ENST00000610538 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
TP53-219ENST00000610538 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
TP53-219ENST00000610538 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
TP53-219ENST00000610538 ERICH6BQ5W0A0 696 aa15.99■□□□□ 0.15
TP53-219ENST00000610538 SLAIN2Q9P270 581 aa15.99■□□□□ 0.15
TP53-219ENST00000610538 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
TP53-219ENST00000610538 CRBNQ96SW2 442 aa15.98■□□□□ 0.15
TP53-219ENST00000610538 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
TP53-219ENST00000610538 MCM10Q7L590 875 aa15.98■□□□□ 0.15
TP53-219ENST00000610538 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
TP53-219ENST00000610538 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
TP53-219ENST00000610538 ELL2O00472 640 aaPredicted RBP15.97■□□□□ 0.15
TP53-219ENST00000610538 IP6K1Q92551 441 aa15.97■□□□□ 0.15
TP53-219ENST00000610538 AXIN2Q9Y2T1 843 aa15.96■□□□□ 0.15
TP53-219ENST00000610538 MTHFSDQ2M296 383 aaKnown RBP15.96■□□□□ 0.15
TP53-219ENST00000610538 NPHP3Q7Z494 1330 aa15.96■□□□□ 0.14
TP53-219ENST00000610538 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
TP53-219ENST00000610538 NBPF6Q5VWK0 638 aa15.95■□□□□ 0.14
TP53-219ENST00000610538 NBPF4Q96M43 638 aa15.95■□□□□ 0.14
TP53-219ENST00000610538 MARF1Q9Y4F3 1742 aaKnown RBP15.95■□□□□ 0.14
TP53-219ENST00000610538 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
TP53-219ENST00000610538 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
TP53-219ENST00000610538 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
TP53-219ENST00000610538 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
TP53-219ENST00000610538 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
TP53-219ENST00000610538 DCCP43146 1447 aa15.93■□□□□ 0.14
TP53-219ENST00000610538 CHRNA2Q15822 529 aa15.93■□□□□ 0.14
TP53-219ENST00000610538 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.93■□□□□ 0.14
TP53-219ENST00000610538 MIS18AQ9NYP9 233 aa15.93■□□□□ 0.14
TP53-219ENST00000610538 TNNQ9UQP3 1299 aa15.93■□□□□ 0.14
TP53-219ENST00000610538 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
TP53-219ENST00000610538 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
TP53-219ENST00000610538 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
TP53-219ENST00000610538 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
TP53-219ENST00000610538 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
TP53-219ENST00000610538 ARHGEF10O15013 1369 aa15.91■□□□□ 0.14
TP53-219ENST00000610538 IL16Q14005 1332 aa15.91■□□□□ 0.14
TP53-219ENST00000610538 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
TP53-219ENST00000610538 NFAT5O94916 1531 aa15.9■□□□□ 0.14
TP53-219ENST00000610538 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
TP53-219ENST00000610538 ANKRD24Q8TF21 1146 aa15.9■□□□□ 0.14
TP53-219ENST00000610538 SSH1Q8WYL5 1049 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 SMC4Q9NTJ3 1288 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 USP19O94966 1318 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 RTF1Q92541 710 aaKnown RBP15.89■□□□□ 0.13
TP53-219ENST00000610538 LTN1O94822 1766 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 KDRP35968 1356 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
TP53-219ENST00000610538 GNAI1P63096 354 aa15.88■□□□□ 0.13
TP53-219ENST00000610538 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
TP53-219ENST00000610538 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
TP53-219ENST00000610538 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms