RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 ATAD2Q6PL18 1390 aa15.53■□□□□ 0.08
MSH6-212ENST00000607272 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
MSH6-212ENST00000607272 HSP90AA2PQ14568 343 aaPredicted RBP15.52■□□□□ 0.08
MSH6-212ENST00000607272 TBC1D9Q6ZT07 1266 aa15.52■□□□□ 0.08
MSH6-212ENST00000607272 PPIP5K1Q6PFW1 1433 aa15.52■□□□□ 0.08
MSH6-212ENST00000607272 RGL2O15211 777 aa15.52■□□□□ 0.07
MSH6-212ENST00000607272 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.07
MSH6-212ENST00000607272 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
MSH6-212ENST00000607272 PIK3R4Q99570 1358 aa15.51■□□□□ 0.07
MSH6-212ENST00000607272 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
MSH6-212ENST00000607272 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
MSH6-212ENST00000607272 CCDC173Q0VFZ6 552 aa15.5■□□□□ 0.07
MSH6-212ENST00000607272 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
MSH6-212ENST00000607272 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
MSH6-212ENST00000607272 CD2BP2O95400 341 aaKnown RBP15.49■□□□□ 0.07
MSH6-212ENST00000607272 ANP32BQ92688 251 aaKnown RBP15.49■□□□□ 0.07
MSH6-212ENST00000607272 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
MSH6-212ENST00000607272 KLHL40Q2TBA0 621 aa15.49■□□□□ 0.07
MSH6-212ENST00000607272 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
MSH6-212ENST00000607272 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
MSH6-212ENST00000607272 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
MSH6-212ENST00000607272 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 ABCC3O15438 1527 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 NEXMIFQ5QGS0 1516 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 PTCH1Q13635 1447 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 CDC45O75419 566 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
MSH6-212ENST00000607272 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
MSH6-212ENST00000607272 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 VAMP4O75379 141 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 PPP1R9BQ96SB3 815 aa15.48■□□□□ 0.07
MSH6-212ENST00000607272 ANKRD26Q9UPS8 1709 aa15.47■□□□□ 0.07
MSH6-212ENST00000607272 CAMSAP1Q5T5Y3 1602 aa15.47■□□□□ 0.07
MSH6-212ENST00000607272 TPM2P07951 284 aa15.47■□□□□ 0.07
MSH6-212ENST00000607272 NASPP49321 788 aaPredicted RBP15.47■□□□□ 0.07
MSH6-212ENST00000607272 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
MSH6-212ENST00000607272 PIK3C2BO00750 1634 aa15.46■□□□□ 0.07
MSH6-212ENST00000607272 FRMPD1Q5SYB0 1578 aa15.46■□□□□ 0.07
MSH6-212ENST00000607272 SSFA2P28290 1259 aa15.46■□□□□ 0.07
MSH6-212ENST00000607272 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
MSH6-212ENST00000607272 STK26Q9P289 416 aa15.46■□□□□ 0.07
MSH6-212ENST00000607272 DDX49Q9Y6V7 483 aaKnown RBP15.46■□□□□ 0.07
MSH6-212ENST00000607272 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.06
MSH6-212ENST00000607272 ABCC4O15439 1325 aa15.46■□□□□ 0.06
MSH6-212ENST00000607272 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
MSH6-212ENST00000607272 GNAI1P63096 354 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 RABEP1Q15276 862 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 SIRT2Q8IXJ6 389 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
MSH6-212ENST00000607272 CD163L1Q9NR16 1453 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 FAM135BQ49AJ0 1406 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 POGZQ7Z3K3 1410 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 IFT57Q9NWB7 429 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
MSH6-212ENST00000607272 NUCB2P80303 420 aa15.44■□□□□ 0.06
MSH6-212ENST00000607272 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
MSH6-212ENST00000607272 ZSCAN30Q86W11 494 aa15.44■□□□□ 0.06
MSH6-212ENST00000607272 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
MSH6-212ENST00000607272 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
MSH6-212ENST00000607272 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
MSH6-212ENST00000607272 SLC52A1Q9NWF4 448 aa15.43■□□□□ 0.06
MSH6-212ENST00000607272 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
MSH6-212ENST00000607272 ZNF445P59923 1031 aa15.42■□□□□ 0.06
MSH6-212ENST00000607272 IDI1Q13907 227 aa15.42■□□□□ 0.06
MSH6-212ENST00000607272 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
MSH6-212ENST00000607272 PTPRMP28827 1452 aa15.42■□□□□ 0.06
MSH6-212ENST00000607272 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 HS1BP3Q53T59 392 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
MSH6-212ENST00000607272 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
MSH6-212ENST00000607272 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
MSH6-212ENST00000607272 CLTCQ00610 1675 aaKnown RBP15.4■□□□□ 0.06
MSH6-212ENST00000607272 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
MSH6-212ENST00000607272 PHACTR3Q96KR7 559 aa15.4■□□□□ 0.06
MSH6-212ENST00000607272 DCTPP1Q9H773 170 aa15.4■□□□□ 0.06
MSH6-212ENST00000607272 MBIPQ9NS73 344 aa15.4■□□□□ 0.06
MSH6-212ENST00000607272 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
MSH6-212ENST00000607272 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
MSH6-212ENST00000607272 LMOD3Q0VAK6 560 aa15.39■□□□□ 0.05
MSH6-212ENST00000607272 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
MSH6-212ENST00000607272 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
MSH6-212ENST00000607272 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
MSH6-212ENST00000607272 YTHDC2Q9H6S0 1430 aaKnown RBP15.39■□□□□ 0.05
MSH6-212ENST00000607272 CYP2E1P05181 493 aaPredicted RBP15.39■□□□□ 0.05
MSH6-212ENST00000607272 TTC22Q5TAA0 569 aa15.39■□□□□ 0.05
MSH6-212ENST00000607272 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
MSH6-212ENST00000607272 USP26Q9BXU7 913 aa15.39■□□□□ 0.05
MSH6-212ENST00000607272 OFD1O75665 1012 aa15.38■□□□□ 0.05
MSH6-212ENST00000607272 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
MSH6-212ENST00000607272 THUMPD2Q9BTF0 503 aaKnown RBP15.38■□□□□ 0.05
MSH6-212ENST00000607272 TERF1P54274 439 aa15.37■□□□□ 0.05
MSH6-212ENST00000607272 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
MSH6-212ENST00000607272 HMOX1P09601 288 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms